ENSG00000133026

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000269243 ENSG00000133026 HEK293_OSMI2_2hA HEK293_TMG_2hB MYH10 protein_coding protein_coding 41.44169 35.04607 46.55755 3.697855 0.7457849 0.4096605 34.006540 25.193112 38.192892 4.6219803 0.4606226 0.600080 0.81434583 0.70800000 0.8204667 0.1124667 2.220191e-01 7.719203e-12 FALSE TRUE
ENST00000685418 ENSG00000133026 HEK293_OSMI2_2hA HEK293_TMG_2hB MYH10 protein_coding nonsense_mediated_decay 41.44169 35.04607 46.55755 3.697855 0.7457849 0.4096605 1.171033 6.454761 0.000000 1.6970638 0.0000000 -9.336453 0.03621667 0.19733333 0.0000000 -0.1973333 7.719203e-12 7.719203e-12 FALSE TRUE
ENST00000692526 ENSG00000133026 HEK293_OSMI2_2hA HEK293_TMG_2hB MYH10 protein_coding protein_coding 41.44169 35.04607 46.55755 3.697855 0.7457849 0.4096605 3.549796 2.129725 5.611699 0.5304587 0.2505914 1.393581 0.08232917 0.05913333 0.1205333 0.0614000 1.006533e-03 7.719203e-12 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000133026 E001 0.6234634 0.0185214181 2.218699e-01 3.526323e-01 17 8471177 8472572 1396 - 0.107 0.329 2.014
ENSG00000133026 E002 0.0000000       17 8472573 8472720 148 -      
ENSG00000133026 E003 2.2897121 0.5172555898 5.899300e-01 7.129173e-01 17 8472721 8474206 1486 - 0.511 0.491 -0.094
ENSG00000133026 E004 0.9566701 0.2266428602 3.675545e-01 5.119280e-01 17 8474207 8474211 5 - 0.193 0.395 1.409
ENSG00000133026 E005 1.4339167 0.0260755232 1.978244e-01 3.235055e-01 17 8474212 8474214 3 - 0.265 0.513 1.427
ENSG00000133026 E006 3.4955644 0.0056550286 1.799694e-01 3.011461e-01 17 8474215 8474223 9 - 0.547 0.771 0.960
ENSG00000133026 E007 3.9393998 0.0378650700 1.952622e-01 3.203068e-01 17 8474224 8474224 1 - 0.580 0.819 0.999
ENSG00000133026 E008 3.9393998 0.0378650700 1.952622e-01 3.203068e-01 17 8474225 8474225 1 - 0.580 0.819 0.999
ENSG00000133026 E009 2471.3078606 0.0062146133 7.710571e-17 3.363446e-15 17 8474226 8475948 1723 - 3.215 3.531 1.052
ENSG00000133026 E010 495.4508044 0.0007569707 5.846165e-17 2.585290e-15 17 8476876 8477048 173 - 2.587 2.791 0.680
ENSG00000133026 E011 7.5005596 0.0026149434 1.534508e-01 2.663664e-01 17 8477049 8478311 1263 - 0.986 0.848 -0.522
ENSG00000133026 E012 0.5922303 0.0179801263 4.276225e-01 5.704869e-01 17 8478312 8478337 26 - 0.265 0.139 -1.155
ENSG00000133026 E013 415.2380702 0.0027105681 7.275960e-07 6.226438e-06 17 8478338 8478446 109 - 2.522 2.705 0.609
ENSG00000133026 E014 7.2633920 0.0027400242 6.470558e-01 7.588056e-01 17 8478447 8480109 1663 - 0.918 0.893 -0.097
ENSG00000133026 E015 527.3107681 0.0046518562 1.287132e-03 4.933902e-03 17 8480110 8480318 209 - 2.646 2.794 0.491
ENSG00000133026 E016 325.2388977 0.0032337399 1.777661e-04 8.685972e-04 17 8480402 8480525 124 - 2.431 2.590 0.532
ENSG00000133026 E017 1.8392444 0.0077914059 5.073530e-01 6.429198e-01 17 8480526 8481077 552 - 0.380 0.514 0.695
ENSG00000133026 E018 0.6998377 0.0172671820 8.242451e-01 8.892795e-01 17 8481147 8481321 175 - 0.193 0.245 0.434
ENSG00000133026 E019 300.5508512 0.0009611459 7.715180e-07 6.567298e-06 17 8481322 8481410 89 - 2.397 2.554 0.523
ENSG00000133026 E020 21.3082543 0.0126625306 2.115540e-05 1.304461e-04 17 8481411 8484137 2727 - 1.491 1.115 -1.315
ENSG00000133026 E021 348.1946966 0.0002022059 3.669653e-10 5.888072e-09 17 8484138 8484266 129 - 2.459 2.617 0.526
ENSG00000133026 E022 2.2904667 0.0067906119 1.424978e-01 2.514322e-01 17 8486748 8487432 685 - 0.380 0.643 1.278
ENSG00000133026 E023 415.0511387 0.0024520206 3.562724e-03 1.190594e-02 17 8487433 8487594 162 - 2.557 2.675 0.393
ENSG00000133026 E024 1.2157810 0.0126866730 9.366409e-01 9.641536e-01 17 8487595 8488266 672 - 0.326 0.330 0.020
ENSG00000133026 E025 531.3773293 0.0008161564 2.654798e-03 9.237644e-03 17 8490340 8490552 213 - 2.678 2.772 0.313
ENSG00000133026 E026 1.3609537 0.0106023835 6.974681e-01 7.975882e-01 17 8491409 8492296 888 - 0.380 0.330 -0.303
ENSG00000133026 E027 507.2366053 0.0009400313 1.842211e-01 3.065315e-01 17 8492297 8492509 213 - 2.676 2.737 0.203
ENSG00000133026 E028 0.6266857 0.0179128172 8.275842e-01 8.916098e-01 17 8492653 8492775 123 - 0.193 0.244 0.431
ENSG00000133026 E029 471.8141656 0.0001539211 2.890127e-04 1.335136e-03 17 8492776 8493024 249 - 2.626 2.721 0.316
ENSG00000133026 E030 1.3306604 0.2918253157 1.181951e-02 3.310227e-02 17 8493025 8493732 708 - 0.000 0.569 18.428
ENSG00000133026 E031 375.5227027 0.0022802248 7.064859e-03 2.139373e-02 17 8493733 8493885 153 - 2.520 2.632 0.374
ENSG00000133026 E032 0.9566832 0.0126677293 2.812186e-01 4.211010e-01 17 8493886 8493898 13 - 0.193 0.400 1.430
ENSG00000133026 E033 271.5772015 0.0002273613 8.626263e-02 1.694194e-01 17 8495137 8495241 105 - 2.401 2.472 0.238
ENSG00000133026 E034 401.1816492 0.0001485832 8.438081e-02 1.664198e-01 17 8499270 8499476 207 - 2.572 2.637 0.216
ENSG00000133026 E035 424.8116144 0.0001768199 7.238513e-01 8.175790e-01 17 8500826 8500970 145 - 2.615 2.642 0.090
ENSG00000133026 E036 487.2063430 0.0001488034 4.117122e-01 5.552579e-01 17 8504694 8504906 213 - 2.678 2.697 0.065
ENSG00000133026 E037 2.2380404 0.0126913229 1.489656e-01 2.602791e-01 17 8505604 8506317 714 - 0.380 0.643 1.277
ENSG00000133026 E038 360.4262105 0.0001445808 2.088532e-02 5.334728e-02 17 8506318 8506489 172 - 2.564 2.553 -0.036
ENSG00000133026 E039 295.9646949 0.0018280985 1.993497e-01 3.254251e-01 17 8508554 8508677 124 - 2.474 2.471 -0.009
ENSG00000133026 E040 338.6314140 0.0001438042 3.417954e-02 8.010504e-02 17 8509812 8509949 138 - 2.534 2.526 -0.029
ENSG00000133026 E041 405.9443519 0.0001383041 3.870652e-04 1.724886e-03 17 8512451 8512657 207 - 2.623 2.592 -0.104
ENSG00000133026 E042 329.4265829 0.0001804572 1.347355e-05 8.685891e-05 17 8513538 8513669 132 - 2.544 2.489 -0.183
ENSG00000133026 E043 265.6039237 0.0012904434 3.816750e-04 1.703952e-03 17 8513786 8513894 109 - 2.454 2.389 -0.215
ENSG00000133026 E044 326.8549885 0.0023686893 1.459615e-04 7.297384e-04 17 8518631 8518791 161 - 2.551 2.469 -0.275
ENSG00000133026 E045 216.0636045 0.0004547524 4.484395e-05 2.555899e-04 17 8518881 8518950 70 - 2.368 2.295 -0.243
ENSG00000133026 E046 1.1448190 0.0119709724 9.343001e-01 9.625709e-01 17 8520842 8520877 36 - 0.327 0.329 0.017
ENSG00000133026 E047 213.1134093 0.0020265754 3.018594e-05 1.795208e-04 17 8520878 8520923 46 - 2.374 2.272 -0.342
ENSG00000133026 E048 233.0600580 0.0035023269 2.390405e-04 1.129174e-03 17 8520924 8520985 62 - 2.412 2.313 -0.332
ENSG00000133026 E049 161.3933577 0.0034585284 6.356998e-05 3.489249e-04 17 8520986 8520999 14 - 2.263 2.137 -0.422
ENSG00000133026 E050 1.0436561 0.0187775377 8.763966e-03 2.569336e-02 17 8521000 8521091 92 - 0.472 0.000 -17.809
ENSG00000133026 E051 353.9212241 0.0062112651 7.513865e-06 5.134280e-05 17 8521092 8521285 194 - 2.614 2.463 -0.505
ENSG00000133026 E052 0.4482035 0.0282352925 1.262495e-01 2.289333e-01 17 8521286 8521519 234 - 0.265 0.000 -16.586
ENSG00000133026 E053 0.0000000       17 8530623 8530685 63 -      
ENSG00000133026 E054 1.1866362 0.0128476522 9.368931e-01 9.643237e-01 17 8531586 8535386 3801 - 0.327 0.329 0.018
ENSG00000133026 E055 252.8362999 0.0091089255 1.466233e-04 7.325739e-04 17 8535387 8535501 115 - 2.469 2.316 -0.513
ENSG00000133026 E056 278.6634378 0.0103858545 6.258187e-04 2.627706e-03 17 8535758 8535931 174 - 2.507 2.365 -0.474
ENSG00000133026 E057 1.0330444 0.0478265343 7.802462e-01 8.587522e-01 17 8540709 8541199 491 - 0.265 0.330 0.438
ENSG00000133026 E058 0.1515154 0.0423993380 6.015289e-01   17 8542050 8542106 57 - 0.107 0.000 -15.001
ENSG00000133026 E059 249.4945618 0.0048470973 3.204728e-06 2.382475e-05 17 8542107 8542280 174 - 2.463 2.308 -0.517
ENSG00000133026 E060 0.5880631 0.4139201034 5.354102e-01 6.672534e-01 17 8543646 8545447 1802 - 0.107 0.254 1.505
ENSG00000133026 E061 243.8561841 0.0004176378 2.589941e-21 1.923389e-19 17 8545448 8545600 153 - 2.472 2.268 -0.681
ENSG00000133026 E062 185.0453690 0.0016699720 7.171963e-13 1.800804e-11 17 8546544 8546625 82 - 2.354 2.149 -0.682
ENSG00000133026 E063 114.2315196 0.0043532508 5.088109e-07 4.495299e-06 17 8546626 8546662 37 - 2.143 1.945 -0.665
ENSG00000133026 E064 0.1515154 0.0423993380 6.015289e-01   17 8546663 8547723 1061 - 0.107 0.000 -15.001
ENSG00000133026 E065 141.1624143 0.0026287409 5.101701e-07 4.506046e-06 17 8548313 8548408 96 - 2.221 2.058 -0.545
ENSG00000133026 E066 202.6743687 0.0050840585 1.077008e-07 1.087611e-06 17 8548644 8548787 144 - 2.389 2.197 -0.640
ENSG00000133026 E067 0.5181333 0.0199140215 7.072025e-01 8.051787e-01 17 8550721 8552045 1325 - 0.193 0.139 -0.566
ENSG00000133026 E068 194.8668905 0.0069490948 4.485237e-06 3.228277e-05 17 8552046 8552144 99 - 2.370 2.184 -0.620
ENSG00000133026 E069 0.1451727 0.0429292164 6.021798e-01   17 8553928 8553954 27 - 0.107 0.000 -15.001
ENSG00000133026 E070 180.2057206 0.0047011836 1.655461e-07 1.612370e-06 17 8553955 8554018 64 - 2.337 2.146 -0.637
ENSG00000133026 E071 0.0000000       17 8554019 8554289 271 -      
ENSG00000133026 E072 197.7293255 0.0044397015 2.681340e-12 6.140116e-11 17 8569720 8569812 93 - 2.400 2.141 -0.866
ENSG00000133026 E073 0.0000000       17 8573751 8573813 63 -      
ENSG00000133026 E074 0.0000000       17 8573814 8574987 1174 -      
ENSG00000133026 E075 0.1451727 0.0429292164 6.021798e-01   17 8574988 8576642 1655 - 0.107 0.000 -15.001
ENSG00000133026 E076 4.0435135 0.0477843503 2.982774e-01 4.397183e-01 17 8576643 8576669 27 - 0.761 0.607 -0.650
ENSG00000133026 E077 3.1191101 0.0373574426 3.865679e-02 8.854753e-02 17 8576670 8576672 3 - 0.740 0.400 -1.568
ENSG00000133026 E078 0.3729606 0.0263943565 8.684847e-01 9.194634e-01 17 8576673 8576831 159 - 0.107 0.139 0.434
ENSG00000133026 E079 164.8267384 0.0036297432 1.910676e-17 9.024476e-16 17 8577236 8577338 103 - 2.341 2.022 -1.068
ENSG00000133026 E080 0.0000000       17 8578459 8580123 1665 -      
ENSG00000133026 E081 95.4892663 0.0094447457 1.264208e-09 1.837787e-08 17 8589081 8589108 28 - 2.111 1.777 -1.123
ENSG00000133026 E082 195.2393485 0.0147866093 4.695083e-07 4.175717e-06 17 8604826 8604982 157 - 2.404 2.118 -0.954
ENSG00000133026 E083 383.0109648 0.0115380872 4.903322e-13 1.264352e-11 17 8622902 8623277 376 - 2.719 2.357 -1.205
ENSG00000133026 E084 36.4831392 0.0032145138 5.705457e-14 1.678909e-12 17 8623424 8623497 74 - 1.741 1.255 -1.668
ENSG00000133026 E085 0.2903454 0.2964171196 3.496484e-01   17 8629713 8629776 64 - 0.193 0.000 -15.997
ENSG00000133026 E086 0.3030308 0.3573062578 3.633922e-01   17 8629948 8630067 120 - 0.194 0.000 -16.008
ENSG00000133026 E087 103.8050119 0.0008095630 1.116701e-27 1.538586e-25 17 8630654 8630865 212 - 2.166 1.769 -1.331
ENSG00000133026 E088 14.1605212 0.0225132876 7.964553e-05 4.262078e-04 17 8630921 8631423 503 - 1.331 0.895 -1.579