ENSG00000131844

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000340941 ENSG00000131844 HEK293_OSMI2_2hA HEK293_TMG_2hB MCCC2 protein_coding protein_coding 52.37793 61.25843 52.10172 2.827636 1.284979 -0.233536 26.487009 22.393470 34.2674556 3.306711 1.1427839 0.6135378 0.51265000 0.36770000 0.657433333 0.28973333 5.770779e-04 3.741671e-35 FALSE TRUE
ENST00000682045 ENSG00000131844 HEK293_OSMI2_2hA HEK293_TMG_2hB MCCC2 protein_coding protein_coding 52.37793 61.25843 52.10172 2.827636 1.284979 -0.233536 2.075445 4.857669 0.1381503 2.283124 0.1381503 -5.0380976 0.03904583 0.07723333 0.002533333 -0.07470000 1.212280e-02 3.741671e-35 FALSE TRUE
ENST00000682231 ENSG00000131844 HEK293_OSMI2_2hA HEK293_TMG_2hB MCCC2 protein_coding processed_transcript 52.37793 61.25843 52.10172 2.827636 1.284979 -0.233536 7.149892 20.796095 0.0000000 3.365072 0.0000000 -11.0227905 0.12685000 0.33863333 0.000000000 -0.33863333 3.741671e-35 3.741671e-35 FALSE TRUE
ENST00000683789 ENSG00000131844 HEK293_OSMI2_2hA HEK293_TMG_2hB MCCC2 protein_coding protein_coding 52.37793 61.25843 52.10172 2.827636 1.284979 -0.233536 9.980223 7.698904 9.7842883 2.092519 1.1446703 0.3454148 0.19163333 0.12570000 0.187633333 0.06193333 4.051497e-01 3.741671e-35 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

No results under this category.

Splicing

All exons whithin this gene region are shown and numbering below.

No results under this category.

Transcripts

All isoforms whithin this gene region are shown below.

No results under this category.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000131844 E001 0.3686942 0.0318095657 9.971431e-01 1.000000e+00 5 71579531 71580217 687 + 0.114 0.131 0.225
ENSG00000131844 E002 1.3587887 0.0106889700 5.027601e-01 6.387616e-01 5 71580218 71581043 826 + 0.280 0.441 0.959
ENSG00000131844 E003 0.9212829 0.0362319303 6.706761e-01 7.770582e-01 5 71582450 71582573 124 + 0.205 0.314 0.815
ENSG00000131844 E004 0.2934659 0.0290792941 9.966623e-01   5 71582951 71583018 68 + 0.114 0.131 0.219
ENSG00000131844 E005 0.0000000       5 71583822 71583951 130 +      
ENSG00000131844 E006 0.1482932 0.0413054827 4.957082e-01   5 71584033 71584166 134 + 0.000 0.131 29.125
ENSG00000131844 E007 0.5202097 0.0201985359 5.570566e-01 6.855622e-01 5 71586745 71586786 42 + 0.205 0.131 -0.776
ENSG00000131844 E008 1.5134115 0.0092920074 3.364884e-01 4.803327e-01 5 71586787 71586850 64 + 0.280 0.492 1.221
ENSG00000131844 E009 0.1451727 0.0430163997 4.839310e-01   5 71587265 71587275 11 + 0.114 0.000 -29.522
ENSG00000131844 E010 0.4418608 0.0252534725 8.236234e-02 1.632400e-01 5 71587276 71587277 2 + 0.280 0.000 -31.319
ENSG00000131844 E011 0.5901540 0.0203835766 3.035722e-01 4.455028e-01 5 71587278 71587279 2 + 0.280 0.131 -1.365
ENSG00000131844 E012 1.0287926 0.2661797088 3.772611e-01 5.215985e-01 5 71587280 71587287 8 + 0.398 0.226 -1.134
ENSG00000131844 E013 1.3254807 0.2533852611 2.034041e-01 3.304658e-01 5 71587288 71587293 6 + 0.492 0.227 -1.619
ENSG00000131844 E014 3.7893224 0.0041888665 9.378862e-02 1.810429e-01 5 71587294 71587295 2 + 0.765 0.581 -0.778
ENSG00000131844 E015 3.9365715 0.0041858043 6.506958e-02 1.351448e-01 5 71587296 71587297 2 + 0.787 0.581 -0.866
ENSG00000131844 E016 5.1104110 0.0078920862 2.980908e-03 1.020721e-02 5 71587298 71587302 5 + 0.931 0.581 -1.422
ENSG00000131844 E017 5.4404085 0.0069858228 1.100848e-02 3.118215e-02 5 71587303 71587303 1 + 0.931 0.654 -1.100
ENSG00000131844 E018 6.2583636 0.0026637738 9.480580e-03 2.748971e-02 5 71587304 71587305 2 + 0.975 0.717 -1.001
ENSG00000131844 E019 7.4657255 0.0027813805 1.144729e-02 3.222801e-02 5 71587306 71587308 3 + 1.027 0.797 -0.871
ENSG00000131844 E020 19.7980781 0.0065439590 1.471143e-04 7.346873e-04 5 71587309 71587316 8 + 1.425 1.169 -0.898
ENSG00000131844 E021 42.9081724 0.0030060796 7.448793e-09 9.399530e-08 5 71587317 71587333 17 + 1.758 1.485 -0.931
ENSG00000131844 E022 45.4742238 0.0057220610 2.177506e-07 2.072558e-06 5 71587334 71587339 6 + 1.778 1.519 -0.881
ENSG00000131844 E023 57.2831460 0.0038039327 1.230374e-09 1.791764e-08 5 71587340 71587355 16 + 1.879 1.614 -0.897
ENSG00000131844 E024 76.3338282 0.0149980680 4.744112e-04 2.062270e-03 5 71587356 71587369 14 + 1.969 1.788 -0.609
ENSG00000131844 E025 124.6151210 0.0104269068 1.206545e-03 4.662443e-03 5 71587370 71587442 73 + 2.154 2.035 -0.396
ENSG00000131844 E026 188.1602017 0.0104642829 1.101038e-04 5.684380e-04 5 71587443 71587554 112 + 2.343 2.202 -0.471
ENSG00000131844 E027 0.7384472 0.0443699707 6.389803e-01 7.524882e-01 5 71592871 71592925 55 + 0.280 0.230 -0.370
ENSG00000131844 E028 239.0554548 0.0030131236 3.617027e-09 4.832404e-08 5 71592926 71592992 67 + 2.443 2.310 -0.444
ENSG00000131844 E029 297.6445331 0.0010398950 1.192638e-13 3.353743e-12 5 71596280 71596364 85 + 2.530 2.416 -0.378
ENSG00000131844 E030 308.1052687 0.0001849571 1.281851e-15 4.785082e-14 5 71599659 71599760 102 + 2.534 2.445 -0.296
ENSG00000131844 E031 134.0788868 0.0002685984 4.192860e-08 4.593596e-07 5 71602506 71602510 5 + 2.177 2.083 -0.312
ENSG00000131844 E032 333.9368909 0.0002396174 4.412045e-17 1.979746e-15 5 71602511 71602633 123 + 2.571 2.478 -0.312
ENSG00000131844 E033 0.0000000       5 71602634 71603065 432 +      
ENSG00000131844 E034 332.1362005 0.0007523924 1.865602e-08 2.187625e-07 5 71604356 71604468 113 + 2.550 2.495 -0.183
ENSG00000131844 E035 277.6939509 0.0002038763 4.342806e-11 8.144078e-10 5 71626640 71626753 114 + 2.478 2.411 -0.225
ENSG00000131844 E036 1.4091281 0.0091320969 8.418164e-02 1.661055e-01 5 71631151 71631279 129 + 0.493 0.231 -1.586
ENSG00000131844 E037 0.6299079 0.0261358201 3.062044e-01 4.483653e-01 5 71631539 71632120 582 + 0.280 0.131 -1.363
ENSG00000131844 E038 305.2081134 0.0001866262 1.593957e-11 3.209379e-10 5 71632121 71632185 65 + 2.519 2.456 -0.211
ENSG00000131844 E039 5.7867707 0.0482007443 2.990142e-04 1.375704e-03 5 71633138 71634942 1805 + 1.028 0.491 -2.201
ENSG00000131844 E040 212.0619372 0.0001982460 2.256242e-05 1.381954e-04 5 71634943 71634952 10 + 2.344 2.316 -0.093
ENSG00000131844 E041 352.8046672 0.0004335225 9.506145e-07 7.921662e-06 5 71634953 71635042 90 + 2.564 2.539 -0.085
ENSG00000131844 E042 400.7603878 0.0001587801 7.049422e-06 4.851570e-05 5 71635151 71635246 96 + 2.609 2.605 -0.015
ENSG00000131844 E043 2.5665334 0.0522251205 4.088719e-02 9.267935e-02 5 71635247 71636103 857 + 0.692 0.379 -1.493
ENSG00000131844 E044 5.0961471 0.0096067725 5.141878e-01 6.489330e-01 5 71636104 71636167 64 + 0.692 0.844 0.611
ENSG00000131844 E045 0.2966881 0.0270449526 1.964932e-01   5 71636168 71636711 544 + 0.205 0.000 -30.715
ENSG00000131844 E046 2.1412206 0.0069228757 4.876060e-03 1.558405e-02 5 71639622 71639811 190 + 0.664 0.231 -2.363
ENSG00000131844 E047 0.2903454 0.3083365302 2.736006e-01   5 71639812 71639851 40 + 0.204 0.000 -29.543
ENSG00000131844 E048 1.3598223 0.0094394349 3.017137e-01 4.435244e-01 5 71639852 71640009 158 + 0.448 0.312 -0.780
ENSG00000131844 E049 1.0309706 0.0136038158 3.545754e-03 1.185592e-02 5 71640010 71640384 375 + 0.493 0.000 -32.699
ENSG00000131844 E050 0.1472490 0.0436084823 4.832523e-01   5 71640385 71640415 31 + 0.114 0.000 -29.516
ENSG00000131844 E051 1.0245142 0.1393059964 9.797471e-03 2.826384e-02 5 71640416 71640544 129 + 0.492 0.000 -31.692
ENSG00000131844 E052 0.5848434 0.0220191492 3.627216e-02 8.410526e-02 5 71640545 71640561 17 + 0.343 0.000 -31.775
ENSG00000131844 E053 0.8803856 0.0427585513 9.569610e-02 1.839310e-01 5 71640562 71640704 143 + 0.399 0.131 -2.103
ENSG00000131844 E054 3.7655780 0.0043450382 3.132704e-03 1.065553e-02 5 71640705 71641002 298 + 0.828 0.441 -1.704
ENSG00000131844 E055 368.3497259 0.0001446215 1.122983e-03 4.380367e-03 5 71641003 71641075 73 + 2.562 2.578 0.052
ENSG00000131844 E056 7.6864144 0.0022325036 3.498091e-01 4.940050e-01 5 71641076 71641083 8 + 0.961 0.923 -0.141
ENSG00000131844 E057 15.6048011 0.0144546230 3.009302e-02 7.214032e-02 5 71641084 71641195 112 + 1.294 1.153 -0.499
ENSG00000131844 E058 30.5211647 0.0006430222 2.672954e-15 9.570142e-14 5 71641196 71642663 1468 + 1.673 1.226 -1.544
ENSG00000131844 E059 3.5763849 0.0044986235 5.120995e-03 1.625828e-02 5 71642664 71642727 64 + 0.808 0.440 -1.626
ENSG00000131844 E060 1.5123699 0.0089007064 4.840135e-02 1.063302e-01 5 71643043 71643062 20 + 0.533 0.231 -1.779
ENSG00000131844 E061 10.0567603 0.0030757244 2.218149e-04 1.057188e-03 5 71643063 71643770 708 + 1.172 0.844 -1.213
ENSG00000131844 E062 4.1760007 0.0037768698 4.430609e-02 9.894212e-02 5 71643771 71643818 48 + 0.808 0.581 -0.948
ENSG00000131844 E063 192.7960659 0.0001961824 8.365392e-01 8.977960e-01 5 71643819 71643845 27 + 2.253 2.324 0.238
ENSG00000131844 E064 240.5107375 0.0002020727 1.978389e-01 3.235189e-01 5 71643846 71643895 50 + 2.329 2.435 0.356
ENSG00000131844 E065 7.2887549 0.0026860652 8.938736e-04 3.592543e-03 5 71643896 71646210 2315 + 1.051 0.718 -1.280
ENSG00000131844 E066 212.6113790 0.0002196191 1.205262e-01 2.207142e-01 5 71646211 71646223 13 + 2.271 2.386 0.384
ENSG00000131844 E067 295.0778032 0.0001797700 2.483739e-01 3.840068e-01 5 71646224 71646277 54 + 2.420 2.521 0.337
ENSG00000131844 E068 0.1451727 0.0430163997 4.839310e-01   5 71649070 71649096 27 + 0.114 0.000 -29.522
ENSG00000131844 E069 484.0990479 0.0001425569 4.205291e-01 5.637376e-01 5 71649097 71649253 157 + 2.639 2.729 0.299
ENSG00000131844 E070 0.2214452 0.0447056023 4.920741e-01   5 71649254 71649296 43 + 0.000 0.131 29.097
ENSG00000131844 E071 0.3686942 0.0318095657 9.971431e-01 1.000000e+00 5 71649297 71649348 52 + 0.114 0.131 0.225
ENSG00000131844 E072 1.5918646 0.0153698228 5.127138e-02 1.114194e-01 5 71649349 71650068 720 + 0.533 0.231 -1.777
ENSG00000131844 E073 414.9517964 0.0002504242 2.294188e-01 3.617430e-01 5 71650069 71650183 115 + 2.567 2.666 0.328
ENSG00000131844 E074 1.1124400 0.0121989077 2.431973e-01 3.779388e-01 5 71650184 71650352 169 + 0.399 0.231 -1.100
ENSG00000131844 E075 1.0373134 0.0119363367 3.475423e-03 1.165387e-02 5 71650353 71651234 882 + 0.493 0.000 -32.729
ENSG00000131844 E076 0.7782011 0.0160182878 6.378031e-01 7.516026e-01 5 71651235 71651509 275 + 0.280 0.231 -0.365
ENSG00000131844 E077 1.0717687 0.0616592570 5.976234e-02 1.262142e-01 5 71651510 71651927 418 + 0.449 0.131 -2.363
ENSG00000131844 E078 1.8478684 0.0078814839 1.850690e-03 6.760398e-03 5 71651928 71651992 65 + 0.635 0.131 -3.237
ENSG00000131844 E079 2.6323977 0.0666127495 7.786976e-02 1.560567e-01 5 71651993 71652668 676 + 0.665 0.385 -1.345
ENSG00000131844 E080 351.1233024 0.0001696640 1.617873e-02 4.311695e-02 5 71652669 71652754 86 + 2.481 2.604 0.410
ENSG00000131844 E081 2.5549793 0.0058739632 3.950158e-02 9.011110e-02 5 71652755 71653850 1096 + 0.664 0.381 -1.363
ENSG00000131844 E082 3018.3838836 0.0040613124 2.633409e-21 1.954138e-19 5 71656743 71658706 1964 + 3.308 3.599 0.967