ENSG00000130294

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000460788 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding retained_intron 31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 2.0472431 6.87031558 0.01711131 3.22039239 0.008558165 -7.987436 0.051291667 0.1603667 0.0006333333 -0.15973333 7.594867e-05 1.062616e-46 FALSE TRUE
ENST00000649096 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding protein_coding 31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 20.6363504 24.40524147 17.99253477 3.93781240 0.186247676 -0.439582 0.694429167 0.5448333 0.6904000000 0.14556667 3.023069e-01 1.062616e-46 FALSE TRUE
ENST00000649190 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding processed_transcript 31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 3.4707950 9.15859581 0.00000000 1.11937019 0.000000000 -9.840557 0.082779167 0.2047000 0.0000000000 -0.20470000 1.062616e-46 1.062616e-46 FALSE TRUE
ENST00000650053 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding protein_coding 31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 0.9719804 0.01012098 2.93662110 0.01012098 0.108636135 7.194217 0.036387500 0.0002000 0.1129333333 0.11273333 1.810516e-41 1.062616e-46 FALSE TRUE
MSTRG.20173.2 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding   31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 1.8018997 2.90783696 1.14635756 0.48488838 0.105476763 -1.335312 0.055154167 0.0651000 0.0437000000 -0.02140000 2.854623e-01 1.062616e-46 FALSE TRUE
MSTRG.20173.21 ENSG00000130294 HEK293_OSMI2_2hA HEK293_TMG_2hB KIF1A protein_coding   31.08515 44.51392 26.14127 2.662907 1.174406 -0.7676997 0.2019535 0.00000000 1.51681281 0.00000000 0.758642206 7.254379 0.007579167 0.0000000 0.0569666667 0.05696667 1.349084e-01 1.062616e-46 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000130294 E001 0.0000000       2 240713761 240713763 3 -      
ENSG00000130294 E002 0.6234634 0.0203930354 6.534854e-01 7.639456e-01 2 240713764 240713766 3 - 0.150 0.247 0.892
ENSG00000130294 E003 65.9858231 0.0243161900 1.745230e-05 1.097049e-04 2 240713767 240713805 39 - 1.451 1.912 1.566
ENSG00000130294 E004 83.8445834 0.0250601505 1.616598e-04 7.991327e-04 2 240713806 240713815 10 - 1.605 2.005 1.350
ENSG00000130294 E005 111.3953733 0.0219549210 5.101493e-05 2.868863e-04 2 240713816 240713833 18 - 1.732 2.125 1.324
ENSG00000130294 E006 1950.4544633 0.0079204844 1.881761e-13 5.150158e-12 2 240713834 240715322 1489 - 3.000 3.358 1.192
ENSG00000130294 E007 641.7819986 0.0015884803 2.443589e-19 1.449376e-17 2 240715323 240715710 388 - 2.583 2.858 0.916
ENSG00000130294 E008 1111.6099782 0.0031085350 4.858376e-08 5.253152e-07 2 240715711 240716668 958 - 2.873 3.082 0.694
ENSG00000130294 E009 373.6338850 0.0041035081 4.798379e-06 3.431367e-05 2 240716669 240716975 307 - 2.391 2.612 0.738
ENSG00000130294 E010 96.1916521 0.0085504977 1.839277e-07 1.775157e-06 2 240716976 240716982 7 - 1.682 2.058 1.267
ENSG00000130294 E011 90.3963281 0.0115333044 3.582751e-06 2.637016e-05 2 240716983 240716983 1 - 1.663 2.030 1.239
ENSG00000130294 E012 90.2962079 0.0042678443 5.595971e-09 7.239909e-08 2 240716984 240716992 9 - 1.663 2.029 1.233
ENSG00000130294 E013 86.8341288 0.0018324561 7.247492e-12 1.543581e-10 2 240716993 240717004 12 - 1.627 2.014 1.307
ENSG00000130294 E014 140.0041746 0.0002479737 3.127880e-15 1.109469e-13 2 240717005 240717082 78 - 1.882 2.206 1.086
ENSG00000130294 E015 83.7985258 0.0003477985 3.345801e-07 3.065049e-06 2 240717083 240717095 13 - 1.704 1.976 0.915
ENSG00000130294 E016 188.6283458 0.0023860263 2.493066e-11 4.870116e-10 2 240717096 240717182 87 - 2.030 2.335 1.019
ENSG00000130294 E017 383.9284554 0.0034532099 2.608624e-09 3.581131e-08 2 240717183 240717363 181 - 2.372 2.633 0.869
ENSG00000130294 E018 202.2354574 0.0093305078 5.370302e-04 2.298402e-03 2 240717364 240717406 43 - 2.110 2.351 0.804
ENSG00000130294 E019 317.9238684 0.0053957366 2.019753e-04 9.723671e-04 2 240718050 240718168 119 - 2.331 2.538 0.690
ENSG00000130294 E020 352.3032325 0.0001853133 5.401618e-14 1.595199e-12 2 240719006 240719148 143 - 2.371 2.581 0.701
ENSG00000130294 E021 231.3509369 0.0001704410 1.756525e-08 2.070098e-07 2 240719149 240719198 50 - 2.199 2.394 0.650
ENSG00000130294 E022 337.4354073 0.0001430953 2.918301e-07 2.707725e-06 2 240719774 240719926 153 - 2.391 2.549 0.525
ENSG00000130294 E023 1.4351644 0.0500650543 8.102088e-02 1.611393e-01 2 240719927 240719946 20 - 0.541 0.248 -1.688
ENSG00000130294 E024 1.9144873 0.0074217192 1.174564e-01 2.163201e-01 2 240719947 240720224 278 - 0.590 0.358 -1.176
ENSG00000130294 E025 1.3318220 0.0169521703 1.329428e-01 2.382069e-01 2 240720225 240720389 165 - 0.487 0.248 -1.425
ENSG00000130294 E026 3.3184291 0.0135908946 9.316567e-02 1.800722e-01 2 240720627 240720913 287 - 0.744 0.520 -0.977
ENSG00000130294 E027 262.8478443 0.0004618730 1.755277e-04 8.591669e-04 2 240720914 240721038 125 - 2.292 2.436 0.480
ENSG00000130294 E028 0.5117019 0.0230381918 2.183486e-01 3.484208e-01 2 240721039 240721053 15 - 0.000 0.247 22.163
ENSG00000130294 E029 230.6805212 0.0013376463 4.558233e-02 1.012631e-01 2 240721807 240721884 78 - 2.261 2.370 0.365
ENSG00000130294 E030 358.5772176 0.0023573115 3.035167e-02 7.266086e-02 2 240722456 240722656 201 - 2.445 2.565 0.400
ENSG00000130294 E031 329.1491412 0.0033461717 4.407749e-02 9.852454e-02 2 240723413 240723558 146 - 2.405 2.531 0.418
ENSG00000130294 E032 1.0006785 0.0152711151 1.304697e-01 2.348105e-01 2 240723559 240723586 28 - 0.424 0.180 -1.688
ENSG00000130294 E033 236.6979818 0.0002241495 2.401729e-01 3.743411e-01 2 240723975 240724036 62 - 2.295 2.372 0.256
ENSG00000130294 E034 1.5007391 0.0093305484 8.800116e-01 9.270518e-01 2 240724037 240724849 813 - 0.350 0.404 0.310
ENSG00000130294 E035 296.1206891 0.0012640051 7.373833e-01 8.275871e-01 2 240725271 240725404 134 - 2.417 2.457 0.136
ENSG00000130294 E036 2.8828859 0.0066612198 5.827374e-02 1.236674e-01 2 240725405 240726113 709 - 0.710 0.447 -1.202
ENSG00000130294 E037 1.3381647 0.2231440622 2.608273e-01 3.984080e-01 2 240726114 240726183 70 - 0.488 0.251 -1.408
ENSG00000130294 E038 2.2551812 0.0609373844 2.362506e-01 3.698311e-01 2 240726184 240726707 524 - 0.591 0.408 -0.894
ENSG00000130294 E039 1.4779120 0.0116339581 2.360965e-01 3.696449e-01 2 240726708 240726825 118 - 0.487 0.306 -1.011
ENSG00000130294 E040 135.3367166 0.0039137938 8.609776e-01 9.143377e-01 2 240726826 240726837 12 - 2.065 2.125 0.199
ENSG00000130294 E041 253.1312757 0.0004877147 9.947575e-01 1.000000e+00 2 240726838 240726940 103 - 2.343 2.390 0.159
ENSG00000130294 E042 0.4439371 0.0215662353 2.592700e-02 6.379781e-02 2 240728389 240728412 24 - 0.350 0.000 -23.819
ENSG00000130294 E043 27.7628592 0.0007759337 5.934240e-02 1.255148e-01 2 240734719 240734745 27 - 1.482 1.400 -0.284
ENSG00000130294 E044 261.3798790 0.0010144733 8.010650e-01 8.732299e-01 2 240737063 240737168 106 - 2.361 2.403 0.141
ENSG00000130294 E045 0.2966881 0.0273546194 8.449525e-02   2 240737169 240737542 374 - 0.262 0.000 -23.234
ENSG00000130294 E046 0.3289534 0.0289962530 6.696213e-01   2 240739556 240739669 114 - 0.150 0.099 -0.689
ENSG00000130294 E047 219.7444316 0.0034412012 9.857974e-01 9.951422e-01 2 240740058 240740142 85 - 2.280 2.333 0.177
ENSG00000130294 E048 206.7599238 0.0028038137 4.403580e-01 5.820328e-01 2 240740298 240740364 67 - 2.275 2.297 0.075
ENSG00000130294 E049 266.4965069 0.0039030449 1.280615e-01 2.314637e-01 2 240741269 240741377 109 - 2.403 2.399 -0.013
ENSG00000130294 E050 195.6447004 0.0003372222 2.969944e-04 1.367710e-03 2 240742929 240742984 56 - 2.300 2.248 -0.173
ENSG00000130294 E051 239.8210480 0.0033607883 1.963907e-03 7.112935e-03 2 240743942 240744052 111 - 2.395 2.333 -0.207
ENSG00000130294 E052 118.1776201 0.0057998297 4.049731e-03 1.327995e-02 2 240744053 240744060 8 - 2.107 2.017 -0.300
ENSG00000130294 E053 3.3432043 0.0675012012 9.192134e-01 9.529557e-01 2 240744061 240744256 196 - 0.590 0.616 0.112
ENSG00000130294 E054 2.4972675 0.0191949692 1.046184e-02 2.988942e-02 2 240744257 240744334 78 - 0.744 0.358 -1.827
ENSG00000130294 E055 7.0185871 0.0028904921 1.227415e-01 2.238707e-01 2 240744335 240744687 353 - 0.967 0.822 -0.551
ENSG00000130294 E056 232.6694978 0.0003764885 3.081752e-08 3.459316e-07 2 240745427 240745517 91 - 2.400 2.307 -0.310
ENSG00000130294 E057 292.6005593 0.0019931973 4.045056e-03 1.326761e-02 2 240745738 240745906 169 - 2.466 2.428 -0.128
ENSG00000130294 E058 100.1674638 0.0033633635 4.565300e-01 5.969482e-01 2 240745907 240745909 3 - 1.971 1.984 0.043
ENSG00000130294 E059 239.6752637 0.0020079388 2.032706e-01 3.303079e-01 2 240746039 240746177 139 - 2.346 2.356 0.031
ENSG00000130294 E060 0.0000000       2 240746440 240746471 32 -      
ENSG00000130294 E061 0.0000000       2 240746944 240747001 58 -      
ENSG00000130294 E062 193.5502956 0.0005740753 1.066848e-01 2.006564e-01 2 240747236 240747321 86 - 2.258 2.259 0.004
ENSG00000130294 E063 0.2214452 0.0383612386 8.396114e-01   2 240748665 240748718 54 - 0.000 0.099 20.583
ENSG00000130294 E064 218.5036311 0.0026669173 2.128569e-04 1.019083e-03 2 240750429 240750547 119 - 2.363 2.285 -0.261
ENSG00000130294 E065 0.0000000       2 240755812 240755835 24 -      
ENSG00000130294 E066 18.1529864 0.0074591876 8.851979e-01 9.306065e-01 2 240757319 240757594 276 - 1.233 1.267 0.117
ENSG00000130294 E067 2.1703864 0.1583621854 9.292580e-01 9.595129e-01 2 240757730 240758359 630 - 0.424 0.493 0.353
ENSG00000130294 E068 241.6710702 0.0007961065 1.090327e-06 8.977707e-06 2 240758360 240758497 138 - 2.409 2.326 -0.277
ENSG00000130294 E069 267.0918304 0.0002092181 8.053490e-07 6.823998e-06 2 240760665 240760843 179 - 2.443 2.376 -0.224
ENSG00000130294 E070 241.1971592 0.0030961061 2.525649e-03 8.839398e-03 2 240761229 240761377 149 - 2.395 2.337 -0.193
ENSG00000130294 E071 196.4850644 0.0016582067 3.384640e-05 1.987077e-04 2 240762719 240762812 94 - 2.323 2.238 -0.286
ENSG00000130294 E072 163.3479652 0.0021559963 6.413648e-04 2.685236e-03 2 240763019 240763091 73 - 2.235 2.161 -0.247
ENSG00000130294 E073 261.9122506 0.0002060474 4.347369e-11 8.150382e-10 2 240763166 240763346 181 - 2.457 2.352 -0.352
ENSG00000130294 E074 184.1432055 0.0019555668 2.131561e-07 2.032606e-06 2 240765710 240765793 84 - 2.320 2.192 -0.427
ENSG00000130294 E075 226.8965431 0.0003086215 1.105363e-15 4.147507e-14 2 240766915 240767021 107 - 2.423 2.270 -0.513
ENSG00000130294 E076 178.6448874 0.0002303360 2.942975e-15 1.048595e-13 2 240767266 240767345 80 - 2.331 2.161 -0.568
ENSG00000130294 E077 174.7486160 0.0002010335 5.760713e-12 1.246402e-10 2 240769133 240769208 76 - 2.306 2.162 -0.482
ENSG00000130294 E078 159.4568476 0.0002113864 1.109620e-09 1.631718e-08 2 240769627 240769669 43 - 2.259 2.129 -0.435
ENSG00000130294 E079 144.0056762 0.0003861707 5.957369e-11 1.090124e-09 2 240769670 240769706 37 - 2.231 2.075 -0.522
ENSG00000130294 E080 0.3634088 0.3257453169 5.057116e-01   2 240769707 240769742 36 - 0.000 0.181 21.589
ENSG00000130294 E081 0.2214452 0.0383612386 8.396114e-01   2 240769895 240769923 29 - 0.000 0.099 20.583
ENSG00000130294 E082 108.0297870 0.0010460131 1.641289e-07 1.599636e-06 2 240770971 240770975 5 - 2.103 1.953 -0.500
ENSG00000130294 E083 179.8901612 0.0018357050 3.156635e-11 6.054009e-10 2 240770976 240771044 69 - 2.336 2.162 -0.581
ENSG00000130294 E084 143.5670433 0.0014688297 5.942546e-10 9.194688e-09 2 240771045 240771080 36 - 2.235 2.067 -0.563
ENSG00000130294 E085 113.0528750 0.0028273493 9.814236e-10 1.457685e-08 2 240771081 240771104 24 - 2.155 1.947 -0.698
ENSG00000130294 E086 0.5858876 0.0218592389 1.154992e-01 2.135667e-01 2 240771105 240771179 75 - 0.350 0.099 -2.276
ENSG00000130294 E087 0.0000000       2 240771180 240771304 125 -      
ENSG00000130294 E088 0.0000000       2 240772570 240772596 27 -      
ENSG00000130294 E089 223.4138211 0.0002865126 1.942378e-22 1.626061e-20 2 240773114 240773256 143 - 2.443 2.247 -0.654
ENSG00000130294 E090 157.9496418 0.0006876096 8.670187e-15 2.879630e-13 2 240774183 240774261 79 - 2.292 2.101 -0.640
ENSG00000130294 E091 1.0393871 0.0320024686 4.899712e-01 6.273316e-01 2 240774535 240775041 507 - 0.350 0.248 -0.687
ENSG00000130294 E092 1.4017517 0.0106261527 4.173890e-01 5.607544e-01 2 240775042 240775167 126 - 0.424 0.307 -0.688
ENSG00000130294 E093 0.6245948 0.0345763717 2.192990e-01 3.495304e-01 2 240775168 240775299 132 - 0.000 0.249 22.172
ENSG00000130294 E094 0.7353121 0.0879883143 5.844549e-01 7.083792e-01 2 240775300 240775327 28 - 0.262 0.181 -0.671
ENSG00000130294 E095 0.5901394 0.2800070893 1.000000e+00 1.000000e+00 2 240775328 240775850 523 - 0.150 0.185 0.361
ENSG00000130294 E096 173.4455402 0.0025953145 2.575096e-11 5.015876e-10 2 240775851 240775926 76 - 2.334 2.140 -0.649
ENSG00000130294 E097 0.1482932 0.0423645972 8.404182e-01   2 240775927 240776183 257 - 0.000 0.099 20.575
ENSG00000130294 E098 0.0000000       2 240778042 240778062 21 -      
ENSG00000130294 E099 0.1451727 0.0431242697 2.766412e-01   2 240780517 240780660 144 - 0.150 0.000 -22.233
ENSG00000130294 E100 0.3289534 0.0289962530 6.696213e-01   2 240781787 240781938 152 - 0.150 0.099 -0.689
ENSG00000130294 E101 0.0000000       2 240782046 240782120 75 -      
ENSG00000130294 E102 0.0000000       2 240782338 240782589 252 -      
ENSG00000130294 E103 126.4039446 0.0022983228 1.388499e-08 1.666648e-07 2 240782590 240782607 18 - 2.185 2.012 -0.581
ENSG00000130294 E104 161.4891862 0.0032336480 1.939245e-09 2.722978e-08 2 240783044 240783106 63 - 2.298 2.112 -0.620
ENSG00000130294 E105 92.7818105 0.0005831103 1.134008e-10 1.983513e-09 2 240783107 240783109 3 - 2.066 1.865 -0.673
ENSG00000130294 E106 164.2563785 0.0008775872 2.443783e-20 1.624447e-18 2 240783739 240783816 78 - 2.333 2.095 -0.796
ENSG00000130294 E107 197.6247231 0.0014868945 1.582589e-21 1.198787e-19 2 240784989 240785100 112 - 2.419 2.170 -0.832
ENSG00000130294 E108 124.8351641 0.0022976717 1.120274e-09 1.645724e-08 2 240786335 240786363 29 - 2.190 1.998 -0.642
ENSG00000130294 E109 211.1888715 0.0017780411 3.903285e-18 1.997476e-16 2 240786364 240786513 150 - 2.436 2.209 -0.756
ENSG00000130294 E110 155.1398280 0.0024371576 2.238356e-14 6.990599e-13 2 240787251 240787316 66 - 2.305 2.071 -0.782
ENSG00000130294 E111 166.6670385 0.0055819386 8.391085e-10 1.261039e-08 2 240788051 240788116 66 - 2.333 2.106 -0.759
ENSG00000130294 E112 190.3503521 0.0067329309 7.575517e-10 1.148862e-08 2 240788117 240788230 114 - 2.397 2.160 -0.793
ENSG00000130294 E113 0.2924217 0.0290785164 8.496602e-02   2 240788380 240788508 129 - 0.262 0.000 -23.233
ENSG00000130294 E114 146.3913076 0.0064238363 2.880742e-08 3.254311e-07 2 240789236 240789303 68 - 2.272 2.054 -0.727
ENSG00000130294 E115 91.6112589 0.0062143750 6.825908e-08 7.160287e-07 2 240789304 240789312 9 - 2.079 1.843 -0.795
ENSG00000130294 E116 0.0000000       2 240796960 240797047 88 -      
ENSG00000130294 E117 166.4784459 0.0093558146 7.946663e-07 6.743131e-06 2 240797647 240797812 166 - 2.326 2.113 -0.713
ENSG00000130294 E118 0.0000000       2 240797935 240798033 99 -      
ENSG00000130294 E119 0.0000000       2 240818668 240818742 75 -      
ENSG00000130294 E120 0.0000000       2 240818743 240818978 236 -      
ENSG00000130294 E121 0.0000000       2 240819106 240819136 31 -      
ENSG00000130294 E122 0.0000000       2 240819348 240819673 326 -      
ENSG00000130294 E123 72.8224513 0.0188629689 8.011323e-03 2.380627e-02 2 240820122 240820372 251 - 1.933 1.783 -0.505
ENSG00000130294 E124 1.4080839 0.0095928424 1.036574e-03 4.084781e-03 2 240820916 240821036 121 - 0.634 0.099 -3.689
ENSG00000130294 E125 0.6017953 0.1818212744 1.783267e-02 4.677983e-02 2 240821340 240821413 74 - 0.425 0.000 -24.238
ENSG00000130294 E126 0.0000000       2 240824123 240824293 171 -