ENSG00000126777

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000395314 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding protein_coding 49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 9.335248 2.5542491 18.0741614 1.4189517 2.1683761 2.8181184 0.18975000 0.13650000 0.263766667 0.12726667 6.707078e-01 1.955167e-50 FALSE TRUE
ENST00000438792 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding protein_coding 49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 2.349796 0.0000000 10.3713217 0.0000000 1.4327238 10.0197744 0.03246250 0.00000000 0.150000000 0.15000000 1.704253e-23 1.955167e-50 FALSE TRUE
ENST00000554507 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding protein_coding 49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 2.944299 4.3845893 0.0000000 0.6659336 0.0000000 -8.7795845 0.14448750 0.24960000 0.000000000 -0.24960000 1.955167e-50 1.955167e-50 FALSE TRUE
ENST00000555573 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding protein_coding 49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 1.511929 4.0977048 0.2359820 1.4449345 0.1100894 -4.0617076 0.07898750 0.24060000 0.003333333 -0.23726667 3.959098e-07 1.955167e-50 FALSE TRUE
MSTRG.9606.10 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding   49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 1.036545 1.2319900 0.9581503 0.3952023 0.9581503 -0.3593506 0.02859583 0.07473333 0.013300000 -0.06143333 1.170458e-01 1.955167e-50 FALSE TRUE
MSTRG.9606.13 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding   49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 13.753200 0.7050495 15.6098967 0.7050495 1.5760138 4.4491980 0.19957917 0.04146667 0.226133333 0.18466667 7.909547e-02 1.955167e-50 FALSE TRUE
MSTRG.9606.2 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding   49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 2.145999 0.0000000 4.4999210 0.0000000 1.0295786 8.8169583 0.03164167 0.00000000 0.065866667 0.06586667 7.110749e-10 1.955167e-50 FALSE TRUE
MSTRG.9606.23 ENSG00000126777 HEK293_OSMI2_2hA HEK293_TMG_2hB KTN1 protein_coding   49.59449 17.40684 68.78235 1.300872 1.819253 1.981765 11.911216 2.9633342 10.8287525 0.4523697 2.3006639 1.8660452 0.21177083 0.17143333 0.157800000 -0.01363333 9.203133e-01 1.955167e-50 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000126777 E001 0.0000000       14 55559072 55559150 79 +      
ENSG00000126777 E002 0.0000000       14 55580186 55580186 1 +      
ENSG00000126777 E003 0.0000000       14 55580187 55580200 14 +      
ENSG00000126777 E004 0.1515154 0.0424111735 1.000000e+00   14 55580201 55580206 6 + 0.059 0.000 -10.708
ENSG00000126777 E005 0.1515154 0.0424111735 1.000000e+00   14 55580207 55580209 3 + 0.059 0.000 -10.607
ENSG00000126777 E006 5.3017610 0.0182515716 7.347142e-04 3.024279e-03 14 55580210 55580225 16 + 0.793 0.000 -15.775
ENSG00000126777 E007 14.8913886 0.0123690467 3.790313e-05 2.197375e-04 14 55580226 55580253 28 + 1.177 0.505 -2.673
ENSG00000126777 E008 15.6362802 0.0048161669 7.952381e-06 5.404099e-05 14 55580254 55580258 5 + 1.197 0.505 -2.747
ENSG00000126777 E009 40.4389809 0.0130412645 2.228285e-04 1.061218e-03 14 55580259 55580308 50 + 1.566 1.197 -1.282
ENSG00000126777 E010 40.3690591 0.0105329061 3.488221e-03 1.169119e-02 14 55580309 55580314 6 + 1.554 1.288 -0.919
ENSG00000126777 E011 42.0059777 0.0074954915 1.016412e-03 4.015521e-03 14 55580315 55580321 7 + 1.573 1.287 -0.986
ENSG00000126777 E012 41.5704596 0.0061036029 9.556241e-04 3.807185e-03 14 55580322 55580323 2 + 1.568 1.287 -0.971
ENSG00000126777 E013 48.6668941 0.0071610557 2.614572e-04 1.222476e-03 14 55580324 55580354 31 + 1.637 1.334 -1.040
ENSG00000126777 E014 0.5159433 0.2360333799 4.822736e-01 6.204225e-01 14 55580996 55581093 98 + 0.110 0.242 1.363
ENSG00000126777 E015 1.0287806 0.0121192435 2.252668e-01 3.567403e-01 14 55598442 55598493 52 + 0.304 0.000 -13.413
ENSG00000126777 E016 13.9361853 0.0012261967 3.088671e-01 4.511275e-01 14 55601757 55601791 35 + 1.099 0.991 -0.398
ENSG00000126777 E017 26.1438256 0.0052803467 1.042076e-01 1.969003e-01 14 55601792 55601880 89 + 1.361 1.214 -0.516
ENSG00000126777 E018 0.0000000       14 55607346 55607460 115 +      
ENSG00000126777 E019 0.1817044 0.0394424676 8.113291e-02   14 55611977 55612018 42 + 0.000 0.239 15.010
ENSG00000126777 E020 49.4772354 0.0606233340 3.949167e-02 9.009282e-02 14 55612019 55612027 9 + 1.639 1.387 -0.867
ENSG00000126777 E021 248.1164696 0.0206780771 4.134518e-05 2.375279e-04 14 55612028 55612309 282 + 2.337 2.039 -0.995
ENSG00000126777 E022 339.0585682 0.0008080222 2.246200e-24 2.310184e-22 14 55612310 55612571 262 + 2.474 2.156 -1.062
ENSG00000126777 E023 275.7005733 0.0001989098 6.008019e-18 3.024717e-16 14 55616517 55616654 138 + 2.378 2.116 -0.877
ENSG00000126777 E024 291.8660315 0.0038718681 2.555910e-07 2.399572e-06 14 55617964 55618134 171 + 2.396 2.190 -0.690
ENSG00000126777 E025 246.8068445 0.0007321650 4.186935e-11 7.870632e-10 14 55619182 55619312 131 + 2.324 2.107 -0.727
ENSG00000126777 E026 270.4128222 0.0016635568 2.003820e-12 4.677398e-11 14 55627912 55628028 117 + 2.368 2.117 -0.841
ENSG00000126777 E027 306.1541774 0.0021555727 2.644735e-14 8.172193e-13 14 55629957 55630097 141 + 2.425 2.148 -0.923
ENSG00000126777 E028 267.2367425 0.0013667102 2.494201e-10 4.107075e-09 14 55633235 55633341 107 + 2.358 2.143 -0.718
ENSG00000126777 E029 139.6785574 0.0002117324 9.631910e-08 9.807247e-07 14 55634526 55634529 4 + 2.079 1.862 -0.731
ENSG00000126777 E030 302.8244650 0.0001896454 6.003110e-13 1.527153e-11 14 55634530 55634658 129 + 2.411 2.212 -0.664
ENSG00000126777 E031 262.2327100 0.0001878077 3.511914e-10 5.651617e-09 14 55636449 55636536 88 + 2.346 2.162 -0.613
ENSG00000126777 E032 285.5914384 0.0001740283 5.137278e-11 9.526643e-10 14 55637198 55637358 161 + 2.382 2.198 -0.615
ENSG00000126777 E033 111.1402058 0.0006321732 2.157455e-03 7.712490e-03 14 55637359 55637364 6 + 1.967 1.835 -0.444
ENSG00000126777 E034 122.6391141 0.0060794922 1.389203e-01 2.466109e-01 14 55637779 55637793 15 + 1.999 1.931 -0.227
ENSG00000126777 E035 154.4575231 0.0004359235 5.880988e-03 1.829872e-02 14 55637794 55637847 54 + 2.104 2.009 -0.319
ENSG00000126777 E036 139.3616870 0.0010042948 3.176016e-03 1.078504e-02 14 55639185 55639222 38 + 2.064 1.949 -0.385
ENSG00000126777 E037 164.2875565 0.0002059422 3.227122e-04 1.471707e-03 14 55639913 55640003 91 + 2.136 2.012 -0.415
ENSG00000126777 E038 131.3928557 0.0010903550 1.017322e-03 4.018696e-03 14 55640374 55640442 69 + 2.039 1.904 -0.453
ENSG00000126777 E039 111.5536745 0.0003733574 1.709349e-01 2.894011e-01 14 55640933 55640970 38 + 1.955 1.908 -0.161
ENSG00000126777 E040 172.1366206 0.0002170629 2.111088e-01 3.398328e-01 14 55641127 55641208 82 + 2.140 2.109 -0.104
ENSG00000126777 E041 198.9024108 0.0001790661 1.926337e-02 4.990480e-02 14 55641692 55641748 57 + 2.208 2.142 -0.219
ENSG00000126777 E042 145.5284163 0.0010214363 5.611852e-02 1.199089e-01 14 55641749 55641760 12 + 2.073 2.006 -0.222
ENSG00000126777 E043 0.1451727 0.0425115446 1.000000e+00   14 55644275 55644285 11 + 0.059 0.000 -10.606
ENSG00000126777 E044 0.0000000       14 55644286 55644443 158 +      
ENSG00000126777 E045 189.3286983 0.0008502719 2.384077e-02 5.948167e-02 14 55646973 55647007 35 + 2.187 2.117 -0.233
ENSG00000126777 E046 221.9012923 0.0004667843 8.864220e-04 3.566755e-03 14 55648025 55648088 64 + 2.261 2.162 -0.329
ENSG00000126777 E047 165.6558236 0.0002306839 1.214670e-03 4.690300e-03 14 55648089 55648115 27 + 2.136 2.027 -0.365
ENSG00000126777 E048 183.8480766 0.0032912628 2.394367e-02 5.968810e-02 14 55648802 55648870 69 + 2.177 2.092 -0.286
ENSG00000126777 E049 126.1261440 0.0002396363 3.791290e-01 5.234094e-01 14 55649776 55649813 38 + 2.003 1.980 -0.077
ENSG00000126777 E050 225.1430482 0.0018445339 7.028956e-01 8.016463e-01 14 55650328 55650418 91 + 2.248 2.250 0.008
ENSG00000126777 E051 224.7352293 0.0029382414 8.226277e-01 8.881690e-01 14 55650569 55650637 69 + 2.242 2.269 0.090
ENSG00000126777 E052 1.7306946 0.0078301361 9.130023e-01 9.488935e-01 14 55651287 55651375 89 + 0.362 0.392 0.170
ENSG00000126777 E053 172.9207210 0.0004435765 9.829040e-01 9.933648e-01 14 55651890 55651927 38 + 2.132 2.147 0.048
ENSG00000126777 E054 282.5112814 0.0010328543 1.642868e-01 2.807497e-01 14 55652850 55652940 91 + 2.336 2.393 0.189
ENSG00000126777 E055 252.3591277 0.0001512346 7.029755e-02 1.438503e-01 14 55653017 55653085 69 + 2.285 2.350 0.215
ENSG00000126777 E056 205.9453013 0.0002213576 6.241085e-01 7.405501e-01 14 55653559 55653596 38 + 2.206 2.235 0.097
ENSG00000126777 E057 226.8994401 0.0005837943 9.078696e-02 1.763761e-01 14 55656042 55656099 58 + 2.240 2.306 0.222
ENSG00000126777 E058 141.0847672 0.0021114908 7.162099e-01 8.119189e-01 14 55656100 55656101 2 + 2.044 2.073 0.098
ENSG00000126777 E059 179.0023004 0.0002013980 7.423457e-02 1.503058e-01 14 55656102 55656132 31 + 2.137 2.210 0.243
ENSG00000126777 E060 0.7575771 1.0171088260 1.000000e+00 1.000000e+00 14 55656133 55656347 215 + 0.239 0.000 -12.956
ENSG00000126777 E061 215.7792551 0.0023753444 6.753429e-02 1.392510e-01 14 55658546 55658614 69 + 2.215 2.298 0.279
ENSG00000126777 E062 172.5116434 0.0039705596 2.380293e-02 5.940995e-02 14 55659666 55659703 38 + 2.110 2.226 0.387
ENSG00000126777 E063 0.6017953 0.1487333105 5.779942e-01 7.031573e-01 14 55661249 55661273 25 + 0.199 0.000 -12.611
ENSG00000126777 E064 1.0822641 0.1379058783 9.016688e-01 9.413456e-01 14 55661274 55661379 106 + 0.272 0.239 -0.248
ENSG00000126777 E065 1.0738451 0.0123315657 8.616971e-01 9.148300e-01 14 55661380 55661521 142 + 0.271 0.239 -0.246
ENSG00000126777 E066 228.7056488 0.0021943024 1.078023e-02 3.063869e-02 14 55661522 55661612 91 + 2.232 2.341 0.364
ENSG00000126777 E067 0.8900644 0.0768824253 3.158539e-01 4.586238e-01 14 55661613 55661857 245 + 0.271 0.000 -13.192
ENSG00000126777 E068 4.4060845 0.0055852979 3.217062e-01 4.649513e-01 14 55662905 55663196 292 + 0.678 0.505 -0.776
ENSG00000126777 E069 4.1681799 0.0874531616 2.053221e-01 3.328284e-01 14 55663343 55663954 612 + 0.679 0.389 -1.379
ENSG00000126777 E070 159.5659626 0.0002079626 6.561623e-02 1.360698e-01 14 55663955 55664041 87 + 2.084 2.162 0.262
ENSG00000126777 E071 261.1086371 0.0012027667 4.380663e-03 1.420776e-02 14 55667241 55667330 90 + 2.292 2.395 0.346
ENSG00000126777 E072 2.5079548 0.0063842906 2.351142e-02 5.880012e-02 14 55667651 55668803 1153 + 0.539 0.000 -14.694
ENSG00000126777 E073 306.9411802 0.0001645345 3.120264e-05 1.849171e-04 14 55670729 55670809 81 + 2.358 2.476 0.393
ENSG00000126777 E074 1.1802960 0.0107390060 1.751937e-01 2.949297e-01 14 55671315 55671565 251 + 0.334 0.000 -13.606
ENSG00000126777 E075 332.4088034 0.0001419245 2.728497e-07 2.545832e-06 14 55671566 55671655 90 + 2.388 2.524 0.454
ENSG00000126777 E076 4.4895164 0.0145637007 9.635829e-01 9.810447e-01 14 55671656 55671784 129 + 0.651 0.669 0.076
ENSG00000126777 E077 347.0218142 0.0001479316 6.537392e-10 1.003801e-08 14 55671785 55671861 77 + 2.402 2.559 0.522
ENSG00000126777 E078 227.4642929 0.0002062703 2.857382e-07 2.656406e-06 14 55671862 55671877 16 + 2.218 2.378 0.536
ENSG00000126777 E079 2.4484041 0.0221830978 6.349158e-01 7.493128e-01 14 55671878 55672629 752 + 0.481 0.392 -0.468
ENSG00000126777 E080 330.6541424 0.0001536059 1.789720e-11 3.571653e-10 14 55672630 55672701 72 + 2.376 2.548 0.575
ENSG00000126777 E081 0.0000000       14 55672702 55672928 227 +      
ENSG00000126777 E082 184.8103147 0.0001826028 6.106938e-09 7.846328e-08 14 55672929 55672929 1 + 2.118 2.313 0.650
ENSG00000126777 E083 365.4102298 0.0001550628 4.812716e-13 1.242680e-11 14 55672930 55673012 83 + 2.419 2.595 0.587
ENSG00000126777 E084 1.7015498 0.0080397992 9.134035e-01 9.491200e-01 14 55673013 55673171 159 + 0.362 0.392 0.170
ENSG00000126777 E085 147.1230924 0.0002523964 1.431610e-07 1.411608e-06 14 55673172 55673255 84 + 2.018 2.216 0.661
ENSG00000126777 E086 11.1625186 0.0024619357 2.973134e-03 1.018317e-02 14 55673256 55675049 1794 + 1.046 0.594 -1.790
ENSG00000126777 E087 8.1847042 0.0375009376 2.744309e-02 6.689137e-02 14 55675050 55675834 785 + 0.924 0.506 -1.747
ENSG00000126777 E088 335.0256999 0.0016547282 9.422736e-09 1.168112e-07 14 55675835 55675918 84 + 2.378 2.566 0.625
ENSG00000126777 E089 285.6132720 0.0012738230 2.782846e-11 5.391162e-10 14 55678352 55678444 93 + 2.304 2.515 0.705
ENSG00000126777 E090 1.6691959 0.0089425622 3.964474e-01 5.402088e-01 14 55678445 55679564 1120 + 0.334 0.504 0.923
ENSG00000126777 E091 286.6055404 0.0061697457 1.326358e-08 1.597931e-07 14 55679565 55679662 98 + 2.287 2.561 0.912
ENSG00000126777 E092 207.7510721 0.0050663790 1.058197e-06 8.735932e-06 14 55679663 55679685 23 + 2.160 2.395 0.785
ENSG00000126777 E093 2.6614448 0.0053426133 4.911182e-01 6.284197e-01 14 55679686 55680664 979 + 0.520 0.392 -0.662
ENSG00000126777 E094 0.4417471 0.6592373071 1.000000e+00 1.000000e+00 14 55680665 55680685 21 + 0.156 0.000 -12.193
ENSG00000126777 E095 5.6629997 0.0039251198 1.099608e-01 2.054879e-01 14 55680686 55680741 56 + 0.678 0.920 0.962
ENSG00000126777 E096 10.0410570 0.0547034338 5.710872e-02 1.216529e-01 14 55680742 55683723 2982 + 0.876 1.187 1.142
ENSG00000126777 E097 417.2305189 0.0128874455 2.474216e-11 4.835288e-10 14 55684099 55684583 485 + 2.406 2.811 1.349
ENSG00000126777 E098 0.5181333 0.0201395975 4.648065e-01 6.044950e-01 14 55701344 55701526 183 + 0.110 0.239 1.341