ENSG00000124155

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000279036 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding protein_coding 98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 10.823289 18.77200 5.869790 1.001079 1.1204599 -1.6755141 0.10539583 0.1446000 0.08273333 -0.06186667 7.798076e-02 7.851838e-38 FALSE  
ENST00000545755 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding protein_coding 98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 11.064726 21.60447 4.936855 1.628678 0.5682043 -2.1274139 0.10067500 0.1665333 0.06950000 -0.09703333 2.740344e-05 7.851838e-38 FALSE  
ENST00000638489 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding protein_coding 98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 2.261926 0.00000 3.985230 0.000000 0.5312519 8.6421349 0.02899583 0.0000000 0.05616667 0.05616667 7.851838e-38 7.851838e-38 FALSE  
ENST00000639783 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding nonsense_mediated_decay 98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 13.407802 19.49210 7.789873 5.317946 2.8705970 -1.3221067 0.13713333 0.1478333 0.11016667 -0.03766667 7.818887e-01 7.851838e-38 FALSE  
ENST00000640175 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding nonsense_mediated_decay 98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 14.201781 15.23327 13.722949 3.283023 1.9879633 -0.1505306 0.15156250 0.1183000 0.19426667 0.07596667 2.873789e-01 7.851838e-38 FALSE  
MSTRG.20773.17 ENSG00000124155 HEK293_OSMI2_2hA HEK293_TMG_2hB PIGT protein_coding   98.04107 130.3041 70.75098 3.882885 1.816559 -0.8809667 26.960381 30.48748 20.620956 2.358725 1.4416147 -0.5638794 0.27965000 0.2333333 0.29106667 0.05773333 1.472533e-01 7.851838e-38 TRUE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000124155 E001 0.4031496 2.483155e-02 5.059463e-01 6.416473e-01 20 45416084 45416096 13 + 0.000 0.161 9.449
ENSG00000124155 E002 2.5692711 6.147502e-03 4.891327e-01 6.266253e-01 20 45416097 45416106 10 + 0.584 0.480 -0.492
ENSG00000124155 E003 2.7175642 5.746056e-03 6.098415e-01 7.292422e-01 20 45416107 45416111 5 + 0.584 0.511 -0.340
ENSG00000124155 E004 4.9160673 3.219724e-02 6.588275e-02 1.365120e-01 20 45416112 45416121 10 + 0.908 0.640 -1.073
ENSG00000124155 E005 4.9160673 3.219724e-02 6.588275e-02 1.365120e-01 20 45416122 45416122 1 + 0.908 0.640 -1.073
ENSG00000124155 E006 6.2737987 2.785737e-02 4.221214e-02 9.511475e-02 20 45416123 45416126 4 + 0.999 0.722 -1.070
ENSG00000124155 E007 9.0676355 2.181080e-02 9.227208e-02 1.786768e-01 20 45416127 45416131 5 + 1.091 0.890 -0.746
ENSG00000124155 E008 9.0676355 2.181080e-02 9.227208e-02 1.786768e-01 20 45416132 45416132 1 + 1.091 0.890 -0.746
ENSG00000124155 E009 9.3631777 1.327982e-02 6.451948e-02 1.342466e-01 20 45416133 45416136 4 + 1.108 0.901 -0.762
ENSG00000124155 E010 26.8510895 1.014914e-02 6.017162e-01 7.228017e-01 20 45416137 45416140 4 + 1.416 1.385 -0.107
ENSG00000124155 E011 28.3184305 1.010743e-02 5.964291e-01 7.183791e-01 20 45416141 45416141 1 + 1.439 1.408 -0.105
ENSG00000124155 E012 28.9816479 9.317130e-03 6.170295e-01 7.349214e-01 20 45416142 45416142 1 + 1.446 1.419 -0.093
ENSG00000124155 E013 29.1633523 1.051273e-02 6.562743e-01 7.659354e-01 20 45416143 45416143 1 + 1.446 1.423 -0.079
ENSG00000124155 E014 30.2684159 1.338082e-02 6.731641e-01 7.789310e-01 20 45416144 45416144 1 + 1.461 1.439 -0.075
ENSG00000124155 E015 40.2369571 1.255150e-02 5.862860e-01 7.098675e-01 20 45416145 45416149 5 + 1.584 1.556 -0.095
ENSG00000124155 E016 48.0485034 7.336156e-03 4.195218e-01 5.627816e-01 20 45416150 45416150 1 + 1.666 1.628 -0.132
ENSG00000124155 E017 49.9608999 8.316681e-03 3.639901e-01 5.084010e-01 20 45416151 45416151 1 + 1.688 1.642 -0.157
ENSG00000124155 E018 53.9401317 4.135697e-03 7.729919e-02 1.551565e-01 20 45416152 45416153 2 + 1.751 1.661 -0.303
ENSG00000124155 E019 68.0402663 3.956418e-04 1.674024e-03 6.199809e-03 20 45416154 45416156 3 + 1.876 1.749 -0.429
ENSG00000124155 E020 169.1819823 6.599101e-03 1.876855e-01 3.108245e-01 20 45416157 45416174 18 + 2.216 2.168 -0.161
ENSG00000124155 E021 412.7677289 4.296716e-03 4.625445e-02 1.025041e-01 20 45416175 45416312 138 + 2.609 2.553 -0.186
ENSG00000124155 E022 333.6309480 3.859658e-03 1.032253e-01 1.953911e-01 20 45416313 45416343 31 + 2.507 2.464 -0.141
ENSG00000124155 E023 1.9511051 7.971266e-02 7.673174e-01 8.495767e-01 20 45416475 45416516 42 + 0.461 0.413 -0.251
ENSG00000124155 E024 204.9632230 2.175572e-03 2.691303e-01 4.075972e-01 20 45416517 45416518 2 + 2.280 2.257 -0.076
ENSG00000124155 E025 541.3150169 2.312693e-03 2.862899e-01 4.266949e-01 20 45416519 45416654 136 + 2.696 2.683 -0.044
ENSG00000124155 E026 254.7806595 9.954878e-04 3.719814e-01 5.164583e-01 20 45416655 45416664 10 + 2.367 2.357 -0.032
ENSG00000124155 E027 294.7082751 3.259907e-04 1.245930e-01 2.265519e-01 20 45416665 45416694 30 + 2.437 2.416 -0.070
ENSG00000124155 E028 11.9333546 1.563865e-03 1.729003e-10 2.929825e-09 20 45416695 45418240 1546 + 1.400 0.805 -2.165
ENSG00000124155 E029 2.8129602 5.099059e-03 1.704406e-07 1.656209e-06 20 45418241 45418381 141 + 0.956 0.161 -4.166
ENSG00000124155 E030 3.8729844 4.139135e-03 4.146564e-05 2.381044e-04 20 45418382 45418526 145 + 0.978 0.409 -2.441
ENSG00000124155 E031 2.4982986 1.375729e-02 1.349688e-02 3.707042e-02 20 45418527 45418534 8 + 0.758 0.370 -1.816
ENSG00000124155 E032 2.1296043 1.049850e-01 4.115822e-02 9.317554e-02 20 45418535 45418535 1 + 0.720 0.323 -1.943
ENSG00000124155 E033 1.9542427 5.127508e-02 1.082217e-02 3.073803e-02 20 45418536 45418561 26 + 0.720 0.276 -2.259
ENSG00000124155 E034 3.9096273 1.014868e-01 1.068889e-01 2.009502e-01 20 45418562 45418771 210 + 0.854 0.540 -1.316
ENSG00000124155 E035 5.9681823 1.645632e-01 9.102446e-01 9.469381e-01 20 45418772 45418851 80 + 0.758 0.800 0.166
ENSG00000124155 E036 561.4736909 1.243449e-04 9.411826e-07 7.852736e-06 20 45418852 45418979 128 + 2.748 2.682 -0.217
ENSG00000124155 E037 2.4214479 3.002255e-01 2.489429e-02 6.165628e-02 20 45418980 45419142 163 + 0.827 0.230 -3.034
ENSG00000124155 E038 1.5627198 1.065184e-02 1.827003e-03 6.686762e-03 20 45419143 45419277 135 + 0.680 0.161 -3.078
ENSG00000124155 E039 2.3344739 1.089778e-02 7.319276e-01 8.234895e-01 20 45419278 45419294 17 + 0.527 0.479 -0.231
ENSG00000124155 E040 579.7701759 1.012402e-04 6.801960e-08 7.137933e-07 20 45419295 45419395 101 + 2.766 2.695 -0.236
ENSG00000124155 E041 2.8616292 1.237838e-01 6.203696e-01 7.375530e-01 20 45419473 45419503 31 + 0.461 0.590 0.613
ENSG00000124155 E042 272.9072785 1.684719e-04 1.209207e-03 4.672056e-03 20 45419504 45419507 4 + 2.432 2.372 -0.202
ENSG00000124155 E043 513.7031371 3.668576e-04 2.949797e-05 1.758600e-04 20 45419508 45419590 83 + 2.708 2.646 -0.209
ENSG00000124155 E044 0.8942170 1.340083e-02 4.069767e-04 1.801540e-03 20 45419591 45419638 48 + 0.584 0.000 -15.126
ENSG00000124155 E045 0.5858876 2.054960e-02 7.719720e-02 1.550016e-01 20 45419906 45419941 36 + 0.383 0.088 -2.664
ENSG00000124155 E046 1.6532882 2.367464e-02 3.435221e-02 8.043511e-02 20 45419942 45420135 194 + 0.634 0.277 -1.890
ENSG00000124155 E047 340.5395492 1.832277e-04 1.988946e-05 1.234416e-04 20 45420136 45420152 17 + 2.538 2.463 -0.249
ENSG00000124155 E048 561.3755617 1.417225e-04 8.813081e-05 4.662049e-04 20 45420153 45420223 71 + 2.737 2.687 -0.166
ENSG00000124155 E049 2.2496791 6.746703e-03 1.899420e-01 3.136894e-01 20 45420312 45420331 20 + 0.289 0.539 1.381
ENSG00000124155 E050 663.0041554 1.514461e-04 3.449796e-04 1.559942e-03 20 45420332 45420420 89 + 2.802 2.761 -0.134
ENSG00000124155 E051 426.0813776 1.459957e-04 1.282196e-06 1.040515e-05 20 45420421 45420429 9 + 2.635 2.559 -0.252
ENSG00000124155 E052 12.4393144 1.515727e-03 7.299083e-01 8.219979e-01 20 45420508 45420527 20 + 1.092 1.070 -0.077
ENSG00000124155 E053 707.7058328 1.131193e-04 3.432883e-05 2.011971e-04 20 45420528 45420600 73 + 2.834 2.788 -0.152
ENSG00000124155 E054 724.0594518 9.491693e-05 2.803844e-01 4.202471e-01 20 45420601 45420693 93 + 2.813 2.813 -0.001
ENSG00000124155 E055 8.4335845 3.612317e-03 1.053527e-06 8.701552e-06 20 45420694 45421353 660 + 1.232 0.702 -1.994
ENSG00000124155 E056 3.6064707 4.466211e-03 8.560922e-03 2.519169e-02 20 45421354 45421382 29 + 0.854 0.480 -1.608
ENSG00000124155 E057 494.8901988 1.307120e-04 5.795935e-01 7.044569e-01 20 45421383 45421415 33 + 2.630 2.655 0.084
ENSG00000124155 E058 348.5134135 1.382418e-04 2.194857e-01 3.497750e-01 20 45421416 45421416 1 + 2.466 2.507 0.138
ENSG00000124155 E059 720.0288640 1.087086e-04 6.011470e-03 1.864133e-02 20 45421417 45421533 117 + 2.769 2.825 0.189
ENSG00000124155 E060 538.1346004 4.907364e-04 3.403844e-02 7.983262e-02 20 45421534 45421583 50 + 2.643 2.701 0.193
ENSG00000124155 E061 9.8444865 8.173161e-02 9.167061e-01 9.513614e-01 20 45421584 45421664 81 + 1.001 0.983 -0.065
ENSG00000124155 E062 38.8347353 3.506620e-03 8.130007e-05 4.341297e-04 20 45421665 45423103 1439 + 1.705 1.470 -0.800
ENSG00000124155 E063 14.3852257 1.881212e-03 5.981343e-01 7.197923e-01 20 45423104 45423505 402 + 1.168 1.132 -0.129
ENSG00000124155 E064 9.7632923 1.764051e-03 9.561772e-01 9.765607e-01 20 45423506 45423591 86 + 0.978 0.998 0.074
ENSG00000124155 E065 19.7189235 1.463277e-02 6.562910e-01 7.659423e-01 20 45423592 45423767 176 + 1.232 1.294 0.217
ENSG00000124155 E066 12.5030306 3.930833e-02 6.666983e-01 7.741017e-01 20 45423768 45423813 46 + 1.039 1.112 0.266
ENSG00000124155 E067 36.9768338 1.519348e-02 3.964924e-01 5.402508e-01 20 45423814 45424215 402 + 1.468 1.564 0.329
ENSG00000124155 E068 621.1892473 7.655932e-04 8.668745e-04 3.497759e-03 20 45424216 45424269 54 + 2.684 2.769 0.283
ENSG00000124155 E069 874.2264312 1.308658e-03 1.262471e-03 4.851443e-03 20 45424270 45424381 112 + 2.831 2.918 0.289
ENSG00000124155 E070 5.0647000 1.970022e-02 6.764043e-02 1.394326e-01 20 45424382 45424460 79 + 0.908 0.661 -0.987
ENSG00000124155 E071 5.5502009 1.594481e-02 6.077591e-02 1.279365e-01 20 45424461 45424495 35 + 0.933 0.683 -0.984
ENSG00000124155 E072 765.4867252 1.550524e-03 4.045386e-05 2.328521e-04 20 45424496 45424579 84 + 2.754 2.868 0.380
ENSG00000124155 E073 29.6853621 2.875147e-03 8.991130e-01 9.396248e-01 20 45424580 45425123 544 + 1.424 1.449 0.086
ENSG00000124155 E074 1514.0002298 1.080420e-03 9.423454e-15 3.110183e-13 20 45425574 45425915 342 + 3.016 3.173 0.523
ENSG00000124155 E075 953.5716709 1.193358e-03 1.200500e-18 6.565566e-17 20 45425916 45427421 1506 + 2.779 2.982 0.675
ENSG00000124155 E076 4.8148611 6.844474e-02 3.377687e-01 4.816582e-01 20 45427422 45427426 5 + 0.824 0.667 -0.636
ENSG00000124155 E077 9.2800613 4.024203e-03 3.583120e-04 1.612358e-03 20 45427427 45427545 119 + 1.195 0.820 -1.386
ENSG00000124155 E078 1.5573195 2.881102e-02 2.353792e-01 3.688145e-01 20 45429445 45429480 36 + 0.527 0.325 -1.085
ENSG00000124155 E079 4.3148150 1.887750e-02 1.036792e-02 2.966936e-02 20 45429481 45429482 2 + 0.908 0.541 -1.520
ENSG00000124155 E080 10.7978278 2.834581e-02 1.657174e-03 6.144852e-03 20 45429483 45429670 188 + 1.255 0.879 -1.372
ENSG00000124155 E081 0.5985731 2.220146e-02 7.727972e-02 1.551253e-01 20 45429671 45430149 479 + 0.384 0.088 -2.665
ENSG00000124155 E082 3.1344172 5.078150e-02 7.789400e-01 8.577930e-01 20 45431172 45431264 93 + 0.527 0.594 0.307
ENSG00000124155 E083 1.6993823 8.044413e-03 9.261827e-01 9.575297e-01 20 45431265 45431335 71 + 0.384 0.410 0.144
ENSG00000124155 E084 3.2408984 5.377772e-03 4.724188e-03 1.516172e-02 20 45441911 45443250 1340 + 0.854 0.446 -1.780
ENSG00000124155 E085 4.7616862 5.637786e-02 4.735288e-03 1.519224e-02 20 45445431 45446150 720 + 0.999 0.561 -1.765
ENSG00000124155 E086 3.5211377 6.732204e-02 1.377419e-01 2.449342e-01 20 45446151 45446642 492 + 0.793 0.537 -1.094
ENSG00000124155 E087 6.5373657 1.045880e-02 4.560394e-02 1.013078e-01 20 45446643 45447454 812 + 0.999 0.756 -0.935
ENSG00000124155 E088 3.2889671 5.073061e-03 7.311686e-01 8.228888e-01 20 45447455 45447596 142 + 0.634 0.592 -0.186
ENSG00000124155 E089 2.7730238 1.029838e-02 8.706036e-01 9.208026e-01 20 45447597 45447634 38 + 0.527 0.566 0.181
ENSG00000124155 E090 6.2205035 3.243624e-03 1.724370e-01 2.913687e-01 20 45447635 45447816 182 + 0.933 0.773 -0.619
ENSG00000124155 E091 2.4011945 6.091983e-03 4.118521e-01 5.553953e-01 20 45447817 45448243 427 + 0.384 0.539 0.796
ENSG00000124155 E092 8.8960279 9.150274e-02 9.091181e-02 1.765843e-01 20 45448244 45451934 3691 + 1.140 0.856 -1.052
ENSG00000124155 E093 0.2955422 2.890626e-02 5.676755e-01   20 45451935 45451997 63 + 0.168 0.088 -1.080
ENSG00000124155 E094 1.6596163 8.887399e-03 2.286004e-01 3.607589e-01 20 45451998 45452177 180 + 0.527 0.326 -1.078
ENSG00000124155 E095 1.3284849 4.372643e-02 7.161486e-01 8.118736e-01 20 45456609 45456934 326 + 0.289 0.369 0.502