• ENSG00000123388
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000123388

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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©2015-2025 Max Guglielmi
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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000243082 ENSG00000123388 HEK293_OSMI2_2hA HEK293_TMG_2hB HOXC11 protein_coding protein_coding 2.9563 4.302399 2.153605 0.1659409 0.0359038 -0.9950535 0.2891043 0.3538103 0.1462834 0.1744811 0.1140764 -1.2190220 0.09387083 0.08486667 0.06976667 -0.0151000 0.8582306247 0.0003121429 FALSE TRUE
ENST00000546378 ENSG00000123388 HEK293_OSMI2_2hA HEK293_TMG_2hB HOXC11 protein_coding protein_coding 2.9563 4.302399 2.153605 0.1659409 0.0359038 -0.9950535 2.3726877 3.3592657 2.0073215 0.4514497 0.1499773 -0.7399932 0.80239583 0.77503333 0.93023333 0.1552000 0.2935633231 0.0003121429 FALSE TRUE
MSTRG.7373.1 ENSG00000123388 HEK293_OSMI2_2hA HEK293_TMG_2hB HOXC11 protein_coding   2.9563 4.302399 2.153605 0.1659409 0.0359038 -0.9950535 0.1960323 0.4793642 0.0000000 0.1320526 0.0000000 -5.6128367 0.06330417 0.11413333 0.00000000 -0.1141333 0.0003121429 0.0003121429 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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TableFilter v0.7.3

https://www.tablefilter.com/
©2015-2025 Max Guglielmi
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Page of 1
groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000123388 E001 2.7573025 0.025997983 0.12662743 0.22944743 12 53966278 53966449 172 + 0.288 0.596 1.644
ENSG00000123388 E002 0.4386386 0.122615924 0.23001116 0.36247114 12 53966450 53966479 30 + 0.288 0.088 -2.073
ENSG00000123388 E003 1.0297335 0.012603596 0.07160932 0.14601882 12 53972506 53972672 167 + 0.000 0.371 10.925
ENSG00000123388 E004 1.0382412 0.014636701 0.89194153 0.93499802 12 53973126 53973127 2 + 0.288 0.279 -0.064
ENSG00000123388 E005 9.6040287 0.002045605 0.12561888 0.22803188 12 53973128 53973196 69 + 1.073 0.937 -0.500
ENSG00000123388 E006 30.4981847 0.001473472 0.14860627 0.25977572 12 53973197 53973400 204 + 1.493 1.430 -0.218
ENSG00000123388 E007 56.6023025 0.008975175 0.04314922 0.09681975 12 53973401 53973923 523 + 1.773 1.685 -0.298
ENSG00000123388 E008 1.5812529 0.110664654 0.47269950 0.61174909 12 53973924 53973927 4 + 0.459 0.331 -0.718
ENSG00000123388 E009 246.8109263 0.008359212 0.01835041 0.04790055 12 53975181 53977643 2463 + 2.293 2.371 0.259