• ENSG00000119729
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000119729

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000238738 ENSG00000119729 HEK293_OSMI2_2hA HEK293_TMG_2hB RHOQ protein_coding protein_coding 13.30918 7.185485 23.72216 0.2867866 1.30185 1.721679 8.4044599 3.2463050 17.280793 0.73869824 0.5657169 2.408696 0.56459583 0.44850000 0.73070000 0.282200000 0.03170261 0.03170261 FALSE TRUE
ENST00000473428 ENSG00000119729 HEK293_OSMI2_2hA HEK293_TMG_2hB RHOQ protein_coding nonsense_mediated_decay 13.30918 7.185485 23.72216 0.2867866 1.30185 1.721679 2.0133002 2.8505100 1.353581 0.47038535 0.8324339 -1.068872 0.20737500 0.39960000 0.05516667 -0.344433333 0.12406227 0.03170261 FALSE FALSE
ENST00000489448 ENSG00000119729 HEK293_OSMI2_2hA HEK293_TMG_2hB RHOQ protein_coding retained_intron 13.30918 7.185485 23.72216 0.2867866 1.30185 1.721679 0.5412370 0.1874130 0.735292 0.09878933 0.1229857 1.916588 0.05399167 0.02506667 0.03073333 0.005666667 0.82891964 0.03170261   FALSE
ENST00000494370 ENSG00000119729 HEK293_OSMI2_2hA HEK293_TMG_2hB RHOQ protein_coding retained_intron 13.30918 7.185485 23.72216 0.2867866 1.30185 1.721679 0.8607949 0.1896599 1.330681 0.03939191 0.4405835 2.747350 0.06830833 0.02693333 0.05486667 0.027933333 0.38161605 0.03170261 FALSE FALSE
MSTRG.18328.3 ENSG00000119729 HEK293_OSMI2_2hA HEK293_TMG_2hB RHOQ protein_coding   13.30918 7.185485 23.72216 0.2867866 1.30185 1.721679 0.8854230 0.4750130 1.970391 0.25648412 0.2976842 2.029690 0.06423750 0.06676667 0.08463333 0.017866667 0.79982144 0.03170261 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

Rows: 1-10 / 17
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Columns▼Records:
Use the filters above each column to filter and limit table data. Advanced searches can be performed by using the following operators:
<, <=, >, >=, =, *, !, {, }, ||,&&, [empty], [nonempty], rgx:
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TableFilter v0.7.3

https://www.tablefilter.com/
©2015-2025 Max Guglielmi
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Page of 2
groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000119729 E001 0.1451727 0.0434588454 1.000000e+00   2 46541806 46541960 155 + 0.065 0.000 -9.604
ENSG00000119729 E002 5.3779423 0.0123962614 4.039166e-01 5.476803e-01 2 46542490 46542735 246 + 0.752 0.696 -0.230
ENSG00000119729 E003 26.6862043 0.0017635342 7.407837e-02 1.500521e-01 2 46542736 46543031 296 + 1.376 1.319 -0.201
ENSG00000119729 E004 104.8370041 0.0078853842 4.289190e-02 9.634049e-02 2 46543032 46543148 117 + 1.951 1.926 -0.084
ENSG00000119729 E005 112.4224653 0.0051025594 1.911671e-03 6.952188e-03 2 46543149 46543188 40 + 1.990 1.921 -0.232
ENSG00000119729 E006 1.0447003 0.1132233000 6.082565e-01 7.280466e-01 2 46543400 46543753 354 + 0.293 0.219 -0.556
ENSG00000119729 E007 87.0867254 0.0013473923 1.657087e-04 8.167182e-04 2 46543754 46543766 13 + 1.884 1.791 -0.312
ENSG00000119729 E008 115.9089742 0.0003393935 8.211573e-05 4.379914e-04 2 46543767 46543812 46 + 2.003 1.939 -0.215
ENSG00000119729 E009 0.5546650 0.0215243246 1.110120e-01 2.070316e-01 2 46560524 46560689 166 + 0.065 0.366 3.043
ENSG00000119729 E010 0.1817044 0.0438841742 1.355944e-01   2 46572728 46572786 59 + 0.000 0.220 13.410
ENSG00000119729 E011 108.3416440 0.0003321065 3.452564e-03 1.158891e-02 2 46576087 46576127 41 + 1.967 1.942 -0.085
ENSG00000119729 E012 172.3558914 0.0015420446 3.623460e-03 1.207737e-02 2 46576128 46576251 124 + 2.165 2.153 -0.038
ENSG00000119729 E013 155.5812854 0.0010576833 9.465284e-04 3.776605e-03 2 46576561 46576656 96 + 2.124 2.097 -0.088
ENSG00000119729 E014 12.1266244 0.0390468052 4.012940e-01 5.449941e-01 2 46576657 46577125 469 + 1.059 1.010 -0.181
ENSG00000119729 E015 7.6690945 0.0022934802 2.138706e-01 3.430982e-01 2 46580284 46580556 273 + 0.889 0.798 -0.351
ENSG00000119729 E016 10.0807124 0.0016803734 3.605365e-01 5.048567e-01 2 46580557 46580724 168 + 0.978 0.951 -0.101
ENSG00000119729 E017 1248.2010820 0.0060129122 3.462848e-07 3.163401e-06 2 46580928 46584688 3761 + 2.972 3.152 0.600