ENSG00000115677

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000310931 ENSG00000115677 HEK293_OSMI2_2hA HEK293_TMG_2hB HDLBP protein_coding protein_coding 196.2823 226.8202 199.9499 22.86214 3.41396 -0.1819018 28.288861 37.5490364 26.65325 2.1412587 0.2587472 -0.4943072 0.14259167 0.1682000 0.13343333 -0.03476667 0.2731226618 1.141642e-11 FALSE TRUE
ENST00000391976 ENSG00000115677 HEK293_OSMI2_2hA HEK293_TMG_2hB HDLBP protein_coding protein_coding 196.2823 226.8202 199.9499 22.86214 3.41396 -0.1819018 105.559601 132.9898429 96.46917 17.4001882 2.9390514 -0.4631351 0.53272917 0.5824000 0.48233333 -0.10006667 0.0109490821 1.141642e-11 FALSE TRUE
MSTRG.20183.13 ENSG00000115677 HEK293_OSMI2_2hA HEK293_TMG_2hB HDLBP protein_coding   196.2823 226.8202 199.9499 22.86214 3.41396 -0.1819018 8.714496 0.2842043 18.50253 0.2842043 0.9062781 5.9755402 0.04676667 0.0011000 0.09256667 0.09146667 0.0007468013 1.141642e-11 FALSE TRUE
MSTRG.20183.9 ENSG00000115677 HEK293_OSMI2_2hA HEK293_TMG_2hB HDLBP protein_coding   196.2823 226.8202 199.9499 22.86214 3.41396 -0.1819018 31.773592 26.1844971 40.26874 6.3581252 2.1030390 0.6207546 0.16489167 0.1164667 0.20160000 0.08513333 0.1561227535 1.141642e-11 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000115677 E001 0.0000000       2 241227264 241227266 3 -      
ENSG00000115677 E002 0.9899927 1.378705e-02 1.701137e-02 4.495902e-02 2 241227267 241227290 24 - 0.000 0.439 12.609
ENSG00000115677 E003 1493.2432590 5.929596e-03 1.720230e-07 1.670045e-06 2 241227291 241229211 1921 - 3.030 3.237 0.690
ENSG00000115677 E004 160.1333498 2.405062e-04 4.520376e-13 1.173273e-11 2 241229212 241229223 12 - 2.052 2.280 0.765
ENSG00000115677 E005 1463.0727294 3.789938e-03 3.368492e-20 2.198655e-18 2 241229224 241229438 215 - 2.953 3.255 1.004
ENSG00000115677 E006 997.4704227 3.967291e-03 1.522178e-21 1.154411e-19 2 241229439 241229461 23 - 2.767 3.095 1.090
ENSG00000115677 E007 1092.4666589 4.293713e-03 3.418244e-20 2.229178e-18 2 241229462 241229482 21 - 2.809 3.133 1.080
ENSG00000115677 E008 2442.0825660 4.501523e-03 4.772423e-19 2.729011e-17 2 241229483 241229687 205 - 3.171 3.478 1.019
ENSG00000115677 E009 11.6643364 6.283962e-03 3.870161e-03 1.277780e-02 2 241229688 241229832 145 - 0.877 1.201 1.188
ENSG00000115677 E010 2156.9480440 2.522242e-03 2.041624e-21 1.535448e-19 2 241229833 241229961 129 - 3.158 3.410 0.838
ENSG00000115677 E011 6.3399284 1.065091e-02 7.168937e-01 8.124315e-01 2 241229962 241230068 107 - 0.876 0.836 -0.157
ENSG00000115677 E012 19.2244634 2.303706e-02 1.593671e-01 2.742648e-01 2 241230069 241230152 84 - 1.200 1.361 0.564
ENSG00000115677 E013 1254.2791434 1.739512e-03 8.920533e-22 6.917594e-20 2 241230153 241230176 24 - 2.939 3.170 0.766
ENSG00000115677 E014 1194.0952624 1.378359e-03 8.808440e-27 1.116209e-24 2 241230177 241230203 27 - 2.914 3.150 0.787
ENSG00000115677 E015 1620.8118766 1.556084e-03 1.763218e-17 8.373939e-16 2 241230204 241230269 66 - 3.079 3.269 0.631
ENSG00000115677 E016 1362.7603346 3.274744e-03 2.525340e-06 1.922053e-05 2 241230759 241230774 16 - 3.032 3.180 0.491
ENSG00000115677 E017 2834.8495320 1.661081e-03 1.697762e-13 4.678342e-12 2 241230775 241230944 170 - 3.342 3.502 0.533
ENSG00000115677 E018 9.5387528 2.091754e-03 1.075064e-01 2.018581e-01 2 241230945 241231343 399 - 0.897 1.083 0.688
ENSG00000115677 E019 1453.3324900 1.680633e-03 4.050526e-10 6.453827e-09 2 241233820 241233852 33 - 3.061 3.208 0.487
ENSG00000115677 E020 2136.2674585 1.711596e-03 5.362888e-14 1.584997e-12 2 241233853 241233963 111 - 3.213 3.382 0.560
ENSG00000115677 E021 1691.4461457 1.164400e-03 1.074265e-18 5.912734e-17 2 241235121 241235184 64 - 3.109 3.282 0.577
ENSG00000115677 E022 1205.1530165 9.023620e-04 1.119724e-12 2.723435e-11 2 241235185 241235204 20 - 2.987 3.124 0.453
ENSG00000115677 E023 1514.3775322 1.171384e-03 3.292642e-15 1.163988e-13 2 241235205 241235255 51 - 3.071 3.229 0.524
ENSG00000115677 E024 6.2051639 3.551734e-03 9.290675e-01 9.594014e-01 2 241235256 241235275 20 - 0.855 0.853 -0.007
ENSG00000115677 E025 9.9610566 1.871291e-02 7.834960e-01 8.610540e-01 2 241235276 241235489 214 - 1.003 1.040 0.139
ENSG00000115677 E026 1994.9578742 1.193238e-03 1.743869e-13 4.794931e-12 2 241235490 241235594 105 - 3.200 3.345 0.481
ENSG00000115677 E027 7.0102259 5.740017e-03 1.159459e-02 3.257059e-02 2 241235595 241235629 35 - 0.665 1.002 1.320
ENSG00000115677 E028 7.6673927 2.717803e-03 4.009393e-01 5.446099e-01 2 241236108 241236614 507 - 0.855 0.963 0.410
ENSG00000115677 E029 2421.8660269 1.006766e-03 8.072799e-10 1.218328e-08 2 241236615 241236769 155 - 3.306 3.418 0.372
ENSG00000115677 E030 9.1944728 7.935411e-03 1.816226e-01 3.032732e-01 2 241236770 241236771 2 - 0.897 1.061 0.609
ENSG00000115677 E031 30.5029154 6.711691e-03 6.227080e-04 2.615978e-03 2 241238293 241238648 356 - 1.313 1.590 0.955
ENSG00000115677 E032 1289.0712789 5.327199e-04 1.347466e-08 1.621504e-07 2 241238649 241238678 30 - 3.045 3.140 0.314
ENSG00000115677 E033 1666.6929361 1.514220e-04 1.110190e-13 3.133993e-12 2 241238679 241238787 109 - 3.161 3.250 0.295
ENSG00000115677 E034 2116.5115918 6.970844e-05 5.833468e-12 1.260560e-10 2 241239602 241239810 209 - 3.277 3.347 0.234
ENSG00000115677 E035 741.7570419 4.041738e-04 1.501594e-04 7.476789e-04 2 241239811 241239820 10 - 2.820 2.892 0.241
ENSG00000115677 E036 1422.7699633 1.342848e-04 1.103875e-05 7.261568e-05 2 241239901 241239991 91 - 3.111 3.170 0.195
ENSG00000115677 E037 865.8438040 1.184961e-04 4.649781e-03 1.495792e-02 2 241239992 241240017 26 - 2.902 2.950 0.158
ENSG00000115677 E038 1348.5243984 1.081470e-03 4.733269e-01 6.122949e-01 2 241240018 241240122 105 - 3.110 3.130 0.064
ENSG00000115677 E039 4.9839972 1.126208e-01 8.099225e-01 8.793725e-01 2 241240123 241240164 42 - 0.728 0.819 0.362
ENSG00000115677 E040 1823.3280463 5.542279e-04 1.217547e-01 2.224286e-01 2 241242460 241242678 219 - 3.236 3.265 0.096
ENSG00000115677 E041 4.6856223 8.022539e-02 9.804792e-01 9.917660e-01 2 241242679 241242790 112 - 0.729 0.739 0.042
ENSG00000115677 E042 2.0744061 1.212904e-01 5.358375e-01 6.676366e-01 2 241243549 241243688 140 - 0.389 0.525 0.695
ENSG00000115677 E043 2.5140002 1.751786e-02 6.060326e-02 1.276487e-01 2 241246570 241246663 94 - 0.320 0.653 1.684
ENSG00000115677 E044 5.0435330 3.197790e-03 8.216097e-01 8.874831e-01 2 241246664 241246751 88 - 0.757 0.796 0.158
ENSG00000115677 E045 1594.7569324 1.250190e-04 2.121568e-01 3.410764e-01 2 241246752 241246883 132 - 3.198 3.195 -0.011
ENSG00000115677 E046 1293.5277793 4.036681e-04 1.269556e-01 2.299123e-01 2 241247056 241247142 87 - 3.113 3.100 -0.041
ENSG00000115677 E047 2.9978192 3.741046e-01 8.692556e-01 9.199899e-01 2 241247143 241247417 275 - 0.594 0.595 0.001
ENSG00000115677 E048 1466.6718507 1.392917e-03 1.061988e-02 3.026058e-02 2 241248003 241248116 114 - 3.185 3.140 -0.149
ENSG00000115677 E049 712.0656259 2.878869e-03 5.013552e-04 2.164989e-03 2 241248244 241248248 5 - 2.899 2.806 -0.310
ENSG00000115677 E050 1174.8543910 1.977816e-03 2.245814e-04 1.068706e-03 2 241248249 241248328 80 - 3.108 3.029 -0.263
ENSG00000115677 E051 742.2215394 2.051065e-03 3.255232e-05 1.919969e-04 2 241248329 241248348 20 - 2.919 2.822 -0.322
ENSG00000115677 E052 0.2924217 2.717849e-02 1.459405e-01   2 241249358 241249396 39 - 0.237 0.000 -11.983
ENSG00000115677 E053 1458.5895506 1.433992e-03 1.401450e-05 8.999408e-05 2 241249841 241249980 140 - 3.203 3.122 -0.270
ENSG00000115677 E054 15.4415648 1.699944e-03 6.346544e-02 1.324703e-01 2 241249981 241250166 186 - 1.298 1.150 -0.521
ENSG00000115677 E055 33.2693261 6.082817e-04 1.822841e-04 8.877196e-04 2 241250167 241250996 830 - 1.645 1.431 -0.731
ENSG00000115677 E056 670.4912221 1.940266e-03 3.524843e-04 1.590120e-03 2 241252957 241252964 8 - 2.867 2.784 -0.275
ENSG00000115677 E057 839.2602196 1.516369e-03 6.770267e-05 3.690424e-04 2 241252965 241252999 35 - 2.964 2.882 -0.274
ENSG00000115677 E058 903.1153578 4.175161e-04 5.418692e-13 1.387362e-11 2 241253000 241253035 36 - 3.008 2.907 -0.336
ENSG00000115677 E059 1505.8417252 6.029153e-04 2.490181e-18 1.307169e-16 2 241253393 241253497 105 - 3.240 3.118 -0.407
ENSG00000115677 E060 1489.3373061 1.171066e-03 8.362272e-16 3.192160e-14 2 241255051 241255158 108 - 3.246 3.102 -0.480
ENSG00000115677 E061 11.5826905 3.664713e-02 1.118024e-01 2.082023e-01 2 241255159 241255327 169 - 1.201 0.992 -0.757
ENSG00000115677 E062 5.0960228 1.071027e-02 2.589806e-01 3.963317e-01 2 241255328 241255373 46 - 0.855 0.707 -0.590
ENSG00000115677 E063 1502.0257454 1.596395e-03 8.573955e-16 3.267572e-14 2 241255374 241255511 138 - 3.260 3.095 -0.548
ENSG00000115677 E064 973.4049612 8.940170e-04 2.524737e-19 1.495634e-17 2 241255512 241255580 69 - 3.069 2.912 -0.523
ENSG00000115677 E065 1604.7596965 4.613391e-04 3.869369e-45 1.818958e-42 2 241256184 241256382 199 - 3.299 3.116 -0.608
ENSG00000115677 E066 572.9363220 3.028019e-04 1.985531e-28 2.913656e-26 2 241256383 241256393 11 - 2.850 2.674 -0.587
ENSG00000115677 E067 556.0058965 5.773868e-04 6.700409e-27 8.565265e-25 2 241256394 241256399 6 - 2.845 2.652 -0.644
ENSG00000115677 E068 1210.2630791 1.393597e-03 1.628318e-23 1.527885e-21 2 241256600 241256713 114 - 3.184 2.985 -0.664
ENSG00000115677 E069 873.9591404 3.259679e-03 1.397227e-11 2.841354e-10 2 241256714 241256764 51 - 3.041 2.845 -0.650
ENSG00000115677 E070 783.6204135 4.669992e-03 6.987634e-10 1.067914e-08 2 241256765 241256806 42 - 3.001 2.789 -0.705
ENSG00000115677 E071 569.9844024 4.505268e-03 4.752263e-09 6.228739e-08 2 241262711 241262719 9 - 2.859 2.655 -0.677
ENSG00000115677 E072 599.8216947 4.886347e-03 7.142852e-09 9.042982e-08 2 241262720 241262735 16 - 2.883 2.676 -0.689
ENSG00000115677 E073 754.6820892 6.101402e-03 7.438756e-08 7.745259e-07 2 241262736 241262781 46 - 2.982 2.776 -0.687
ENSG00000115677 E074 904.5064672 7.203366e-03 5.952844e-06 4.166815e-05 2 241262782 241262868 87 - 3.049 2.865 -0.613
ENSG00000115677 E075 526.9428189 8.085857e-03 7.294139e-06 4.999829e-05 2 241262869 241262870 2 - 2.822 2.624 -0.661
ENSG00000115677 E076 851.7184833 6.341120e-03 2.916944e-08 3.290302e-07 2 241262871 241262915 45 - 3.039 2.822 -0.721
ENSG00000115677 E077 623.3356115 5.525715e-03 3.496350e-09 4.687043e-08 2 241262916 241262916 1 - 2.906 2.685 -0.738
ENSG00000115677 E078 664.1728798 4.655708e-03 4.434170e-09 5.833516e-08 2 241262917 241262923 7 - 2.925 2.722 -0.677
ENSG00000115677 E079 619.7847078 3.540597e-03 1.117684e-11 2.309576e-10 2 241262924 241262926 3 - 2.900 2.687 -0.708
ENSG00000115677 E080 612.5166082 3.960783e-03 1.655678e-11 3.327285e-10 2 241264448 241264448 1 - 2.899 2.677 -0.737
ENSG00000115677 E081 755.8431269 4.162590e-03 8.613358e-11 1.537669e-09 2 241264449 241264474 26 - 2.986 2.772 -0.711
ENSG00000115677 E082 840.8847647 3.954975e-03 2.495617e-09 3.437203e-08 2 241264475 241264520 46 - 3.020 2.831 -0.629
ENSG00000115677 E083 680.9383453 5.462461e-03 3.005925e-07 2.780991e-06 2 241264521 241264541 21 - 2.928 2.740 -0.627
ENSG00000115677 E084 910.0933632 4.347162e-03 1.176410e-09 1.720453e-08 2 241264542 241264605 64 - 3.060 2.859 -0.668
ENSG00000115677 E085 0.8793520 1.763730e-01 8.460278e-01 9.042756e-01 2 241266537 241266627 91 - 0.237 0.276 0.296
ENSG00000115677 E086 572.5587745 3.159221e-03 3.169324e-10 5.140133e-09 2 241266794 241266811 18 - 2.854 2.664 -0.630
ENSG00000115677 E087 518.7360820 4.322984e-03 9.960731e-10 1.477872e-08 2 241266812 241266817 6 - 2.821 2.610 -0.704
ENSG00000115677 E088 553.1471747 4.126464e-03 8.732532e-10 1.308512e-08 2 241266818 241266826 9 - 2.847 2.640 -0.690
ENSG00000115677 E089 747.7367170 7.605520e-03 6.026506e-07 5.247040e-06 2 241266827 241266865 39 - 2.981 2.767 -0.711
ENSG00000115677 E090 744.2268808 6.728571e-03 1.454805e-08 1.740392e-07 2 241266866 241266906 41 - 2.987 2.756 -0.770
ENSG00000115677 E091 1.3973981 9.342668e-03 9.746466e-01 9.882037e-01 2 241267578 241267591 14 - 0.389 0.391 0.009
ENSG00000115677 E092 3.8384404 4.017933e-03 1.711919e-02 4.520425e-02 2 241267592 241267708 117 - 0.855 0.523 -1.400
ENSG00000115677 E093 576.3907658 6.623372e-03 1.221022e-08 1.482149e-07 2 241268477 241268498 22 - 2.878 2.643 -0.784
ENSG00000115677 E094 623.0925706 5.477400e-03 2.011516e-09 2.814029e-08 2 241268499 241268541 43 - 2.908 2.681 -0.756
ENSG00000115677 E095 5.3403098 2.970680e-03 3.950769e-01 5.389179e-01 2 241268542 241268694 153 - 0.855 0.754 -0.399
ENSG00000115677 E096 2.5366925 3.810385e-01 5.430487e-01 6.737062e-01 2 241268829 241268953 125 - 0.628 0.501 -0.582
ENSG00000115677 E097 3.2033200 1.736707e-02 3.556653e-01 5.000365e-01 2 241268954 241268957 4 - 0.698 0.559 -0.602
ENSG00000115677 E098 8.0297272 5.743556e-02 5.944987e-02 1.256958e-01 2 241268958 241269105 148 - 1.099 0.813 -1.071
ENSG00000115677 E099 5.3131170 6.330109e-03 4.428236e-02 9.889962e-02 2 241269106 241269172 67 - 0.935 0.681 -1.005
ENSG00000115677 E100 4.6069471 5.025106e-03 4.134593e-01 5.569402e-01 2 241269173 241269200 28 - 0.809 0.706 -0.412
ENSG00000115677 E101 6.4096875 2.598765e-03 1.255520e-01 2.279348e-01 2 241269201 241269205 5 - 0.970 0.796 -0.666
ENSG00000115677 E102 9.4313042 1.779896e-03 1.445519e-02 3.925760e-02 2 241269206 241269273 68 - 1.148 0.904 -0.897
ENSG00000115677 E103 5.8479237 4.283234e-03 2.004122e-02 5.157505e-02 2 241269274 241269295 22 - 0.970 0.681 -1.133
ENSG00000115677 E104 4.4743082 4.237755e-02 4.949158e-01 6.318165e-01 2 241269361 241269561 201 - 0.783 0.684 -0.406
ENSG00000115677 E105 5.0984335 3.288015e-03 1.119144e-05 7.352563e-05 2 241271917 241271971 55 - 1.033 0.440 -2.481
ENSG00000115677 E106 180.9340890 1.075306e-02 2.126334e-10 3.544146e-09 2 241272761 241272886 126 - 2.431 2.067 -1.216
ENSG00000115677 E107 1.0758196 1.446980e-02 4.893668e-01 6.268065e-01 2 241273036 241273117 82 - 0.389 0.273 -0.729
ENSG00000115677 E108 0.1515154 4.344887e-02 3.963280e-01   2 241302640 241302724 85 - 0.134 0.000 -10.983
ENSG00000115677 E109 63.5968772 2.900351e-03 2.026316e-06 1.574502e-05 2 241315102 241315292 191 - 1.926 1.694 -0.783
ENSG00000115677 E110 352.9032007 8.733034e-03 1.277038e-03 4.900860e-03 2 241315570 241315820 251 - 2.623 2.475 -0.491
ENSG00000115677 E111 0.1451727 4.350552e-02 3.968902e-01   2 241316871 241317061 191 - 0.134 0.000 -10.983