ENSG00000104763

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000381733 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding protein_coding 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 5.1870305 2.951988 8.351545 0.4564373 0.5199269 1.4972038 0.22843333 0.2104000 0.28593333 0.07553333 3.652942e-01 2.980089e-23 FALSE TRUE
ENST00000635998 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding nonsense_mediated_decay 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 2.7963934 0.000000 5.723466 0.0000000 0.8517723 9.1632637 0.09001667 0.0000000 0.19540000 0.19540000 2.980089e-23 2.980089e-23 TRUE TRUE
ENST00000636009 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding nonsense_mediated_decay 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 2.5089390 1.883925 1.320782 1.0052806 0.6611902 -0.5091048 0.10532083 0.1217667 0.04450000 -0.07726667 8.640855e-01 2.980089e-23 FALSE TRUE
ENST00000636997 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding protein_coding 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 1.5526329 0.000000 1.900843 0.0000000 1.0310863 7.5780655 0.04715000 0.0000000 0.06686667 0.06686667 2.652312e-01 2.980089e-23 FALSE TRUE
ENST00000637528 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding protein_coding 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 0.5295196 0.000000 1.976752 0.0000000 1.0360650 7.6342682 0.02190000 0.0000000 0.06683333 0.06683333 2.581668e-01 2.980089e-23 FALSE TRUE
ENST00000637561 ENSG00000104763 HEK293_OSMI2_2hA HEK293_TMG_2hB ASAH1 protein_coding protein_coding 22.30036 14.3033 29.16976 1.535717 0.6720775 1.027612 6.5254497 7.666251 5.762259 0.9998476 0.5993792 -0.4112659 0.35595000 0.5348000 0.19710000 -0.33770000 5.578466e-09 2.980089e-23 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000104763 E001 1.0717687 0.0575424967 3.503610e-01 4.945375e-01 8 18055992 18056430 439 - 0.359 0.174 -1.383
ENSG00000104763 E002 2.5141176 0.0380374524 3.135965e-01 4.562063e-01 8 18056431 18056451 21 - 0.467 0.647 0.831
ENSG00000104763 E003 2.9882437 0.0417117432 3.468782e-01 4.910263e-01 8 18056452 18056454 3 - 0.527 0.693 0.735
ENSG00000104763 E004 2.8367283 0.0322482722 2.601154e-01 3.975931e-01 8 18056455 18056455 1 - 0.498 0.693 0.874
ENSG00000104763 E005 3.4311341 0.0062624350 1.116408e-01 2.079648e-01 8 18056456 18056458 3 - 0.526 0.773 1.064
ENSG00000104763 E006 3.7600875 0.0177539755 1.013779e-01 1.925678e-01 8 18056459 18056461 3 - 0.553 0.808 1.077
ENSG00000104763 E007 5.4207506 0.0085828669 2.144823e-01 3.438504e-01 8 18056462 18056465 4 - 0.724 0.898 0.686
ENSG00000104763 E008 8.7161662 0.0020383282 2.933380e-01 4.343735e-01 8 18056466 18056469 4 - 0.930 1.055 0.463
ENSG00000104763 E009 9.7491088 0.0017667471 6.882446e-02 1.414225e-01 8 18056470 18056472 3 - 0.941 1.141 0.731
ENSG00000104763 E010 10.3037738 0.0016738995 4.005485e-02 9.113507e-02 8 18056473 18056474 2 - 0.951 1.171 0.798
ENSG00000104763 E011 10.4520670 0.0016543828 2.718774e-02 6.637417e-02 8 18056475 18056476 2 - 0.951 1.185 0.849
ENSG00000104763 E012 19.2371046 0.0009554597 6.844271e-03 2.082098e-02 8 18056477 18056487 11 - 1.205 1.426 0.771
ENSG00000104763 E013 19.3822773 0.0009532676 8.355291e-03 2.467898e-02 8 18056488 18056492 5 - 1.211 1.426 0.751
ENSG00000104763 E014 20.7173229 0.0008798425 2.530106e-02 6.249459e-02 8 18056493 18056502 10 - 1.254 1.434 0.624
ENSG00000104763 E015 34.3561714 0.0008949105 1.619893e-05 1.025956e-04 8 18056503 18056537 35 - 1.424 1.693 0.919
ENSG00000104763 E016 32.6674102 0.0068358756 5.486330e-04 2.341977e-03 8 18056538 18056545 8 - 1.406 1.667 0.893
ENSG00000104763 E017 37.0255541 0.0113915703 7.251524e-04 2.989467e-03 8 18056546 18056570 25 - 1.451 1.730 0.951
ENSG00000104763 E018 82.7367358 0.0003549102 2.949150e-06 2.210165e-05 8 18056571 18056707 137 - 1.831 2.025 0.654
ENSG00000104763 E019 59.2283505 0.0004368686 2.174443e-02 5.514541e-02 8 18056708 18056723 16 - 1.718 1.836 0.398
ENSG00000104763 E020 69.7580867 0.0003414244 4.185484e-01 5.618116e-01 8 18056724 18056752 29 - 1.815 1.860 0.152
ENSG00000104763 E021 54.2316530 0.0004113318 6.361427e-01 7.502386e-01 8 18056753 18056770 18 - 1.729 1.714 -0.049
ENSG00000104763 E022 50.3895511 0.0004502093 7.131016e-01 8.096403e-01 8 18056771 18056781 11 - 1.695 1.684 -0.034
ENSG00000104763 E023 59.3281841 0.0003834277 7.455806e-01 8.335822e-01 8 18056782 18056801 20 - 1.764 1.758 -0.022
ENSG00000104763 E024 50.8465260 0.0010714475 9.788971e-01 9.908456e-01 8 18056802 18056808 7 - 1.695 1.706 0.037
ENSG00000104763 E025 56.1797513 0.0014218602 3.147458e-01 4.574862e-01 8 18056809 18056834 26 - 1.720 1.782 0.209
ENSG00000104763 E026 55.1790859 0.0020314183 3.394965e-01 4.834186e-01 8 18056835 18056879 45 - 1.713 1.774 0.207
ENSG00000104763 E027 44.4846835 0.0005546215 4.320826e-02 9.693384e-02 8 18056880 18056902 23 - 1.596 1.714 0.403
ENSG00000104763 E028 40.5329632 0.0005080091 2.566031e-01 3.935805e-01 8 18056903 18056914 12 - 1.574 1.647 0.251
ENSG00000104763 E029 62.7316694 0.0006646735 1.833785e-01 3.054468e-01 8 18056915 18056998 84 - 1.756 1.827 0.240
ENSG00000104763 E030 41.1776649 0.0229845060 1.121274e-01 2.086577e-01 8 18056999 18057047 49 - 1.543 1.696 0.522
ENSG00000104763 E031 91.8407234 0.0003837956 5.224380e-01 6.562500e-01 8 18057048 18057197 150 - 1.936 1.970 0.115
ENSG00000104763 E032 91.2987865 0.0010601556 2.372810e-03 8.376910e-03 8 18057198 18057331 134 - 1.985 1.866 -0.403
ENSG00000104763 E033 71.9997825 0.0041497656 8.921696e-02 1.739370e-01 8 18057332 18057430 99 - 1.873 1.791 -0.275
ENSG00000104763 E034 158.6936665 0.0002202109 3.938807e-04 1.751184e-03 8 18057431 18057623 193 - 2.216 2.116 -0.332
ENSG00000104763 E035 0.4449813 0.0217681645 9.470086e-01 9.707224e-01 8 18057624 18058834 1211 - 0.155 0.174 0.199
ENSG00000104763 E036 112.2815588 0.0002538827 2.469953e-03 8.673632e-03 8 18058835 18058891 57 - 2.068 1.967 -0.337
ENSG00000104763 E037 0.6192988 0.0198562819 8.254140e-01 8.900410e-01 8 18058892 18059163 272 - 0.216 0.174 -0.383
ENSG00000104763 E038 150.8059147 0.0002685099 1.479719e-06 1.184970e-05 8 18059341 18059464 124 - 2.207 2.062 -0.485
ENSG00000104763 E039 93.4008975 0.0035226479 4.157852e-05 2.386803e-04 8 18059572 18059600 29 - 2.014 1.816 -0.669
ENSG00000104763 E040 140.9570816 0.0004596093 4.090004e-07 3.681295e-06 8 18059601 18059703 103 - 2.181 2.017 -0.549
ENSG00000104763 E041 1.1029768 0.0119958800 3.208760e-01 4.640452e-01 8 18059704 18061376 1673 - 0.359 0.174 -1.382
ENSG00000104763 E042 74.8472661 0.0004583261 1.110186e-05 7.300291e-05 8 18061377 18061389 13 - 1.917 1.723 -0.655
ENSG00000104763 E043 73.9925916 0.0003748203 6.012483e-06 4.204677e-05 8 18061390 18061407 18 - 1.914 1.714 -0.675
ENSG00000104763 E044 89.5015381 0.0002871056 1.438159e-05 9.210778e-05 8 18061408 18061449 42 - 1.988 1.817 -0.576
ENSG00000104763 E045 66.2497995 0.0003700542 3.314093e-05 1.950193e-04 8 18061450 18061458 9 - 1.864 1.671 -0.652
ENSG00000104763 E046 1.3191365 0.0413821799 6.761450e-01 7.812009e-01 8 18061459 18061685 227 - 0.316 0.396 0.471
ENSG00000104763 E047 58.3009608 0.0004037415 1.885819e-05 1.176677e-04 8 18061686 18061686 1 - 1.815 1.602 -0.724
ENSG00000104763 E048 86.5060315 0.0003379653 1.796235e-08 2.112299e-07 8 18061687 18061740 54 - 1.989 1.754 -0.793
ENSG00000104763 E049 2.7879786 0.0089643051 7.844734e-01 8.617276e-01 8 18061741 18062247 507 - 0.579 0.540 -0.179
ENSG00000104763 E050 1.0403321 0.0124303045 5.139842e-01 6.487558e-01 8 18062248 18062278 31 - 0.269 0.394 0.783
ENSG00000104763 E051 84.1599917 0.0009389864 6.430683e-06 4.466468e-05 8 18062279 18062335 57 - 1.966 1.769 -0.663
ENSG00000104763 E052 55.9747699 0.0004323168 3.289391e-04 1.496626e-03 8 18062336 18062339 4 - 1.787 1.607 -0.611
ENSG00000104763 E053 61.8585588 0.0004237220 3.048055e-03 1.040783e-02 8 18062340 18062352 13 - 1.818 1.680 -0.467
ENSG00000104763 E054 53.6667259 0.0005317845 2.325496e-02 5.827799e-02 8 18062353 18062354 2 - 1.749 1.638 -0.378
ENSG00000104763 E055 53.7379048 0.0018580969 1.313549e-02 3.622082e-02 8 18062355 18062367 13 - 1.756 1.623 -0.451
ENSG00000104763 E056 65.4309736 0.0006143777 1.094108e-03 4.284056e-03 8 18062368 18062393 26 - 1.848 1.698 -0.510
ENSG00000104763 E057 71.0516326 0.0017844045 1.128237e-03 4.398782e-03 8 18062394 18062423 30 - 1.884 1.727 -0.531
ENSG00000104763 E058 3.4116350 0.0045593529 1.498738e-03 5.631661e-03 8 18062424 18062931 508 - 0.758 0.174 -3.259
ENSG00000104763 E059 1.9239280 0.0640395002 6.259885e-02 1.310273e-01 8 18062932 18063074 143 - 0.553 0.174 -2.389
ENSG00000104763 E060 1.1834165 0.0108761666 2.304392e-01 3.629865e-01 8 18063075 18063184 110 - 0.398 0.174 -1.607
ENSG00000104763 E061 71.3156578 0.0004889779 1.500468e-06 1.200064e-05 8 18063185 18063230 46 - 1.902 1.680 -0.749
ENSG00000104763 E062 6.3805779 0.0164525793 8.206281e-05 4.377584e-04 8 18063231 18064122 892 - 0.982 0.299 -3.118
ENSG00000104763 E063 1.2608349 0.0104208064 2.328402e-01 3.658012e-01 8 18064123 18064234 112 - 0.398 0.174 -1.605
ENSG00000104763 E064 0.9641468 0.0130731173 4.406510e-01 5.823267e-01 8 18064235 18064278 44 - 0.317 0.174 -1.119
ENSG00000104763 E065 0.5911862 0.0172671820 1.863363e-01 3.091495e-01 8 18064279 18064412 134 - 0.269 0.000 -12.621
ENSG00000104763 E066 0.7437457 0.0155233093 5.994435e-01 7.208184e-01 8 18064413 18064456 44 - 0.269 0.174 -0.800
ENSG00000104763 E067 50.7293757 0.0005570484 1.003358e-05 6.665376e-05 8 18064457 18064468 12 - 1.761 1.519 -0.821
ENSG00000104763 E068 41.5642438 0.0005407509 1.795840e-04 8.762371e-04 8 18064469 18064471 3 - 1.671 1.449 -0.759
ENSG00000104763 E069 40.7692046 0.0005317115 1.162999e-04 5.969295e-04 8 18064472 18064474 3 - 1.665 1.434 -0.792
ENSG00000104763 E070 58.4155229 0.0010546958 2.657710e-08 3.023631e-07 8 18064475 18064531 57 - 1.834 1.532 -1.022
ENSG00000104763 E071 2.4701740 0.0063245604 2.821972e-01 4.221688e-01 8 18064532 18064724 193 - 0.579 0.395 -0.914
ENSG00000104763 E072 6.7400830 0.0241054130 7.719932e-02 1.550016e-01 8 18064725 18065895 1171 - 0.951 0.692 -1.015
ENSG00000104763 E073 2.6392961 0.1022277903 2.566623e-02 6.325061e-02 8 18065896 18066576 681 - 0.666 0.173 -2.890
ENSG00000104763 E074 0.8814178 0.4481185270 2.304101e-01 3.629497e-01 8 18066577 18066762 186 - 0.359 0.000 -12.433
ENSG00000104763 E075 0.8835061 0.1779239950 9.514965e-01 9.736579e-01 8 18066763 18066763 1 - 0.269 0.294 0.176
ENSG00000104763 E076 0.8835061 0.1779239950 9.514965e-01 9.736579e-01 8 18066764 18066766 3 - 0.269 0.294 0.176
ENSG00000104763 E077 19.7366336 0.0239110869 5.915871e-03 1.838883e-02 8 18066767 18066889 123 - 1.175 1.478 1.059
ENSG00000104763 E078 19.4543536 0.0286629603 3.014478e-03 1.030825e-02 8 18066890 18066901 12 - 1.149 1.491 1.195
ENSG00000104763 E079 93.2150422 0.0011043954 5.504499e-44 2.397266e-41 8 18066902 18067219 318 - 1.681 2.239 1.876
ENSG00000104763 E080 69.4190690 0.0003562868 1.356821e-02 3.723357e-02 8 18067220 18067221 2 - 1.786 1.903 0.393
ENSG00000104763 E081 92.6305029 0.0002853548 8.712687e-05 4.615493e-04 8 18067222 18067249 28 - 1.892 2.049 0.527
ENSG00000104763 E082 112.9646477 0.0002704776 9.420726e-06 6.299115e-05 8 18067250 18067298 49 - 1.977 2.137 0.537
ENSG00000104763 E083 0.1451727 0.0432250021 1.000000e+00   8 18067299 18068671 1373 - 0.084 0.000 -10.631
ENSG00000104763 E084 0.1451727 0.0432250021 1.000000e+00   8 18069461 18069791 331 - 0.084 0.000 -10.631
ENSG00000104763 E085 123.1710355 0.0004467706 2.005252e-05 1.243499e-04 8 18069792 18069872 81 - 2.017 2.169 0.507
ENSG00000104763 E086 72.5496217 0.0025120150 1.115877e-03 4.356597e-03 8 18069873 18069878 6 - 1.786 1.951 0.557
ENSG00000104763 E087 86.2193867 0.0032087438 3.732867e-03 1.239124e-02 8 18071300 18071308 9 - 1.868 2.013 0.487
ENSG00000104763 E088 93.4920039 0.0048681819 7.271571e-03 2.193001e-02 8 18071309 18071326 18 - 1.903 2.044 0.473
ENSG00000104763 E089 87.3042566 0.0021918918 8.005334e-03 2.379183e-02 8 18071327 18071330 4 - 1.882 2.009 0.429
ENSG00000104763 E090 128.8676173 0.0043762364 1.856086e-02 4.836527e-02 8 18071331 18071390 60 - 2.053 2.167 0.381
ENSG00000104763 E091 0.1472490 0.0437068215 1.000000e+00   8 18071391 18071411 21 - 0.084 0.000 -10.630
ENSG00000104763 E092 0.6759915 0.4675027357 1.000000e+00 1.000000e+00 8 18073256 18073276 21 - 0.217 0.179 -0.351
ENSG00000104763 E093 107.8596314 0.0051744729 3.863736e-02 8.851696e-02 8 18075541 18075580 40 - 1.979 2.085 0.355
ENSG00000104763 E094 66.8901656 0.0031206717 1.835804e-01 3.057016e-01 8 18075581 18075584 4 - 1.786 1.862 0.257
ENSG00000104763 E095 68.5920767 0.0071434670 1.646192e-01 2.811835e-01 8 18075585 18075587 3 - 1.792 1.881 0.299
ENSG00000104763 E096 1.0382438 0.0119584048 3.178523e-01 4.607557e-01 8 18075588 18075682 95 - 0.359 0.174 -1.385
ENSG00000104763 E097 0.3697384 0.0274424043 5.773278e-02 1.227448e-01 8 18075858 18075922 65 - 0.000 0.298 12.933
ENSG00000104763 E098 0.9578146 0.1703991979 3.778499e-02 8.693531e-02 8 18075923 18076176 254 - 0.085 0.480 3.234
ENSG00000104763 E099 0.7019140 0.0180624055 4.238598e-01 5.668829e-01 8 18076177 18076413 237 - 0.155 0.299 1.203
ENSG00000104763 E100 1.4165150 0.0111348099 8.718608e-01 9.215869e-01 8 18076414 18076682 269 - 0.359 0.394 0.200
ENSG00000104763 E101 0.1451727 0.0432250021 1.000000e+00   8 18082527 18082603 77 - 0.084 0.000 -10.631
ENSG00000104763 E102 0.4439371 0.0215650900 3.096962e-01 4.520356e-01 8 18083122 18083408 287 - 0.216 0.000 -12.217
ENSG00000104763 E103 0.5985731 0.0197800185 8.221784e-01 8.878745e-01 8 18083899 18083916 18 - 0.216 0.174 -0.386
ENSG00000104763 E104 0.5953508 0.0200037701 4.343644e-01 5.767464e-01 8 18083917 18083940 24 - 0.155 0.298 1.198
ENSG00000104763 E105 0.8898489 0.1687084385 9.475976e-01 9.710349e-01 8 18083941 18083980 40 - 0.269 0.294 0.175
ENSG00000104763 E106 88.9051308 0.0058295438 7.474939e-03 2.244935e-02 8 18083981 18084286 306 - 1.879 2.022 0.482
ENSG00000104763 E107 1.9489150 0.0840842310 4.510749e-02 1.003945e-01 8 18084287 18084461 175 - 0.269 0.653 2.029
ENSG00000104763 E108 0.8931703 0.2616213299 6.829832e-01 7.863027e-01 8 18084462 18084586 125 - 0.216 0.305 0.660
ENSG00000104763 E109 2.0162194 0.3825190474 7.897278e-01 8.654621e-01 8 18084587 18084671 85 - 0.436 0.486 0.250
ENSG00000104763 E110 1.3477166 0.5362633481 9.502257e-01 9.728463e-01 8 18084672 18084675 4 - 0.362 0.311 -0.312
ENSG00000104763 E111 20.3106124 0.0085303710 5.576860e-01 6.860561e-01 8 18084676 18084998 323 - 1.284 1.346 0.217