ENSG00000102901

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000565157 ENSG00000102901 HEK293_OSMI2_2hA HEK293_TMG_2hB CENPT protein_coding retained_intron 50.10929 71.52798 32.64691 4.648343 0.964122 -1.131321 12.096181 16.325982 6.485298 2.3294978 0.3737569 -1.3305855 0.23487083 0.22636667 0.19866667 -0.02770000 6.758234e-01 5.980435e-10 FALSE TRUE
ENST00000569862 ENSG00000102901 HEK293_OSMI2_2hA HEK293_TMG_2hB CENPT protein_coding retained_intron 50.10929 71.52798 32.64691 4.648343 0.964122 -1.131321 7.302819 5.147658 6.145827 0.6104763 0.4487121 0.2552365 0.16270000 0.07156667 0.18840000 0.11683333 5.980435e-10 5.980435e-10 FALSE TRUE
ENST00000574569 ENSG00000102901 HEK293_OSMI2_2hA HEK293_TMG_2hB CENPT protein_coding retained_intron 50.10929 71.52798 32.64691 4.648343 0.964122 -1.131321 3.959167 3.858786 3.307423 0.4853058 0.2319074 -0.2218180 0.08589583 0.05356667 0.10133333 0.04776667 1.103390e-04 5.980435e-10   FALSE
ENST00000626059 ENSG00000102901 HEK293_OSMI2_2hA HEK293_TMG_2hB CENPT protein_coding protein_coding 50.10929 71.52798 32.64691 4.648343 0.964122 -1.131321 5.947796 13.076053 1.490139 0.3686436 0.2399947 -3.1248617 0.09470833 0.18490000 0.04593333 -0.13896667 2.731956e-07 5.980435e-10 FALSE TRUE
MSTRG.12848.3 ENSG00000102901 HEK293_OSMI2_2hA HEK293_TMG_2hB CENPT protein_coding   50.10929 71.52798 32.64691 4.648343 0.964122 -1.131321 16.249488 28.021963 11.890731 1.1666036 0.5101567 -1.2360226 0.32705417 0.39320000 0.36470000 -0.02850000 6.766473e-01 5.980435e-10 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000102901 E001 2.6184725 0.0063588304 4.395303e-02 9.829388e-02 16 67828157 67828157 1 - 0.180 0.567 2.392
ENSG00000102901 E002 2.8001769 0.0057660806 3.208563e-02 7.602245e-02 16 67828158 67828158 1 - 0.180 0.591 2.499
ENSG00000102901 E003 3.6848395 0.0051662280 4.174368e-02 9.426387e-02 16 67828159 67828160 2 - 0.306 0.674 1.861
ENSG00000102901 E004 8.0390119 0.0020918572 4.403751e-03 1.427506e-02 16 67828161 67828164 4 - 0.552 0.967 1.690
ENSG00000102901 E005 53.7771143 0.0005080265 2.325247e-03 8.228928e-03 16 67828165 67828184 20 - 1.542 1.715 0.587
ENSG00000102901 E006 53.7771143 0.0005080265 2.325247e-03 8.228928e-03 16 67828185 67828185 1 - 1.542 1.715 0.587
ENSG00000102901 E007 53.9286297 0.0005039153 3.208330e-03 1.087976e-02 16 67828186 67828186 1 - 1.548 1.715 0.566
ENSG00000102901 E008 84.8564290 0.0093174991 3.317653e-03 1.119896e-02 16 67828187 67828208 22 - 1.718 1.916 0.668
ENSG00000102901 E009 241.5403644 0.0063391634 8.959171e-06 6.023237e-05 16 67828209 67828349 141 - 2.154 2.367 0.714
ENSG00000102901 E010 190.0304831 0.0036329022 2.017343e-06 1.568109e-05 16 67828350 67828390 41 - 2.058 2.262 0.682
ENSG00000102901 E011 25.7879682 0.0007592211 2.805377e-04 1.300551e-03 16 67828391 67828473 83 - 1.542 1.283 -0.895
ENSG00000102901 E012 202.3457693 0.0020410770 5.893232e-09 7.597516e-08 16 67828474 67828508 35 - 2.073 2.291 0.728
ENSG00000102901 E013 223.4184000 0.0002934788 3.970945e-11 7.490627e-10 16 67828509 67828559 51 - 2.135 2.327 0.644
ENSG00000102901 E014 174.4007582 0.0002445245 4.812072e-10 7.554758e-09 16 67828560 67828578 19 - 2.017 2.221 0.683
ENSG00000102901 E015 6.5506613 0.0030952935 2.988932e-01 4.403718e-01 16 67828579 67828605 27 - 0.912 0.776 -0.531
ENSG00000102901 E016 452.3335127 0.0006929148 2.835383e-08 3.207086e-07 16 67828667 67828843 177 - 2.491 2.618 0.425
ENSG00000102901 E017 42.4671814 0.0065616117 3.386714e-09 4.552335e-08 16 67828844 67829170 327 - 1.827 1.435 -1.333
ENSG00000102901 E018 358.9206055 0.0004885039 3.019362e-05 1.795609e-04 16 67829423 67829516 94 - 2.412 2.511 0.329
ENSG00000102901 E019 605.2000554 0.0001970119 6.805969e-03 2.071877e-02 16 67829765 67829921 157 - 2.683 2.727 0.148
ENSG00000102901 E020 298.5110922 0.0001666412 4.508654e-01 5.918986e-01 16 67829922 67829929 8 - 2.427 2.406 -0.067
ENSG00000102901 E021 317.9861562 0.0001637747 9.336423e-01 9.622015e-01 16 67829930 67829944 15 - 2.441 2.437 -0.015
ENSG00000102901 E022 293.7872217 0.0001695881 9.750478e-01 9.884538e-01 16 67829945 67829948 4 - 2.404 2.401 -0.011
ENSG00000102901 E023 591.1465203 0.0001174127 2.144543e-01 3.438191e-01 16 67829949 67830088 140 - 2.692 2.710 0.060
ENSG00000102901 E024 207.5303406 0.0062315971 1.209032e-04 6.181617e-04 16 67830089 67830389 301 - 2.379 2.204 -0.585
ENSG00000102901 E025 200.3730840 0.0030049728 2.540845e-02 6.272222e-02 16 67830390 67830394 5 - 2.173 2.259 0.286
ENSG00000102901 E026 451.6800340 0.0001470480 1.219960e-01 2.227770e-01 16 67830395 67830548 154 - 2.568 2.596 0.091
ENSG00000102901 E027 51.3817257 0.0006796979 1.291091e-09 1.874854e-08 16 67830549 67830692 144 - 1.862 1.548 -1.063
ENSG00000102901 E028 74.6903897 0.0004523449 5.842079e-22 4.632752e-20 16 67830693 67830904 212 - 2.075 1.667 -1.373
ENSG00000102901 E029 89.1104258 0.0003365886 3.331874e-36 8.779047e-34 16 67830905 67831215 311 - 2.193 1.713 -1.612
ENSG00000102901 E030 161.0853667 0.0002263831 4.942461e-01 6.312083e-01 16 67831216 67831219 4 - 2.163 2.139 -0.081
ENSG00000102901 E031 445.9735158 0.0001215729 4.440110e-01 5.855945e-01 16 67831220 67831358 139 - 2.597 2.580 -0.057
ENSG00000102901 E032 6.6227877 0.0032274964 3.722120e-04 1.666732e-03 16 67831359 67831575 217 - 1.107 0.674 -1.664
ENSG00000102901 E033 208.8194124 0.0001880656 2.234649e-01 3.545268e-01 16 67831576 67831585 10 - 2.283 2.246 -0.121
ENSG00000102901 E034 239.3327416 0.0001978204 2.309265e-01 3.635847e-01 16 67831586 67831612 27 - 2.340 2.307 -0.112
ENSG00000102901 E035 5.8669257 0.0039490667 2.074052e-05 1.281926e-04 16 67831613 67831753 141 - 1.107 0.567 -2.132
ENSG00000102901 E036 205.6652731 0.0001855002 8.466274e-01 9.046766e-01 16 67831754 67831768 15 - 2.255 2.247 -0.027
ENSG00000102901 E037 221.5246964 0.0001763983 2.775192e-01 4.170913e-01 16 67831769 67831793 25 - 2.261 2.288 0.090
ENSG00000102901 E038 248.4696375 0.0002718598 9.314913e-01 9.608435e-01 16 67831794 67831828 35 - 2.332 2.331 -0.002
ENSG00000102901 E039 204.8696282 0.0020479279 7.234382e-01 8.172815e-01 16 67831829 67831840 12 - 2.240 2.251 0.036
ENSG00000102901 E040 269.6148267 0.0001622927 8.769849e-01 9.250110e-01 16 67831841 67831890 50 - 2.365 2.366 0.003
ENSG00000102901 E041 370.8881010 0.0001361390 6.750351e-01 7.804239e-01 16 67832012 67832108 97 - 2.500 2.506 0.020
ENSG00000102901 E042 5.4521465 0.0030431337 1.984110e-04 9.570558e-04 16 67832109 67832136 28 - 1.051 0.567 -1.931
ENSG00000102901 E043 6.1428892 0.0063407330 2.238996e-07 2.126065e-06 16 67832137 67832227 91 - 1.171 0.515 -2.604
ENSG00000102901 E044 300.1185314 0.0001653490 7.828370e-01 8.605646e-01 16 67832228 67832315 88 - 2.418 2.409 -0.030
ENSG00000102901 E045 36.5933159 0.0070850271 1.635757e-10 2.783519e-09 16 67832316 67832350 35 - 1.792 1.344 -1.534
ENSG00000102901 E046 27.4568907 0.0126913721 1.197315e-07 1.198688e-06 16 67832351 67832354 4 - 1.673 1.223 -1.555
ENSG00000102901 E047 29.3922901 0.0295299917 2.069623e-05 1.279438e-04 16 67832355 67832391 37 - 1.696 1.257 -1.511
ENSG00000102901 E048 34.6260945 0.0355093263 3.172444e-07 2.920502e-06 16 67832392 67832454 63 - 1.823 1.268 -1.901
ENSG00000102901 E049 158.5133166 0.0002461402 4.557686e-03 1.470336e-02 16 67832455 67832461 7 - 2.202 2.111 -0.305
ENSG00000102901 E050 250.8593421 0.0018520765 1.513641e-02 4.079421e-02 16 67832462 67832509 48 - 2.393 2.314 -0.263
ENSG00000102901 E051 198.2747816 0.0036543064 1.846712e-02 4.815742e-02 16 67832510 67832545 36 - 2.304 2.208 -0.319
ENSG00000102901 E052 217.3922171 0.0044548393 3.458443e-02 8.086702e-02 16 67833750 67833839 90 - 2.337 2.250 -0.291
ENSG00000102901 E053 136.1769951 0.0034389334 4.211756e-03 1.373566e-02 16 67833840 67833888 49 - 2.160 2.036 -0.416
ENSG00000102901 E054 12.9128481 0.0027243332 3.724478e-01 5.169155e-01 16 67833889 67833889 1 - 1.140 1.047 -0.337
ENSG00000102901 E055 12.8721623 0.0110533824 5.036967e-01 6.396643e-01 16 67833890 67833944 55 - 1.124 1.050 -0.268
ENSG00000102901 E056 1.2866677 0.0563438306 8.274303e-01 8.914897e-01 16 67833945 67833955 11 - 0.306 0.348 0.264
ENSG00000102901 E057 1.2866677 0.0563438306 8.274303e-01 8.914897e-01 16 67833956 67833965 10 - 0.306 0.348 0.264
ENSG00000102901 E058 1.1383745 0.0190928882 9.879333e-01 9.965020e-01 16 67833966 67833973 8 - 0.306 0.308 0.009
ENSG00000102901 E059 2.4146366 0.2133689532 2.915514e-01 4.324159e-01 16 67833974 67834024 51 - 0.705 0.388 -1.496
ENSG00000102901 E060 1.2762621 0.2463388867 6.214980e-02 1.302588e-01 16 67834025 67834033 9 - 0.608 0.153 -2.861
ENSG00000102901 E061 1.4245553 0.1467176185 6.941476e-02 1.423892e-01 16 67834034 67834044 11 - 0.609 0.210 -2.300
ENSG00000102901 E062 2.4919558 0.0803474526 2.353129e-02 5.884515e-02 16 67834045 67834100 56 - 0.786 0.349 -2.052
ENSG00000102901 E063 0.2214452 0.0373512830 1.000000e+00   16 67834125 67834212 88 - 0.000 0.082 9.563
ENSG00000102901 E064 3.1207178 0.0199718734 6.598932e-03 2.018321e-02 16 67835172 67835247 76 - 0.854 0.423 -1.898
ENSG00000102901 E065 2.7916612 0.0054455575 2.863437e-01 4.267414e-01 16 67835248 67835295 48 - 0.662 0.487 -0.796
ENSG00000102901 E066 0.6652806 0.0184602620 8.776018e-01 9.253637e-01 16 67835296 67835300 5 - 0.180 0.209 0.273
ENSG00000102901 E067 0.4417591 0.1215606367 8.475969e-01 9.053500e-01 16 67835301 67835338 38 - 0.180 0.149 -0.329
ENSG00000102901 E068 0.5890081 0.0330454651 3.812726e-01 5.255760e-01 16 67835538 67835586 49 - 0.306 0.150 -1.316
ENSG00000102901 E069 1.0621892 0.0260595579 2.914009e-01 4.322720e-01 16 67835587 67835658 72 - 0.404 0.210 -1.304
ENSG00000102901 E070 2.5766448 0.0058421229 7.104312e-01 8.076103e-01 16 67841568 67841950 383 - 0.552 0.487 -0.310
ENSG00000102901 E071 0.8416995 0.0967926454 1.528079e-01 2.654702e-01 16 67842958 67842998 41 - 0.000 0.307 11.450
ENSG00000102901 E072 0.3299976 0.0274424043 5.771621e-01   16 67842999 67843030 32 - 0.000 0.150 10.679
ENSG00000102901 E073 0.9179615 0.0161637140 2.840393e-01 4.242485e-01 16 67843031 67843337 307 - 0.404 0.209 -1.313
ENSG00000102901 E074 0.0000000       16 67846772 67846823 52 -      
ENSG00000102901 E075 0.0000000       16 67847401 67847579 179 -      
ENSG00000102901 E076 1.7619383 0.0144337147 9.434088e-01 9.685087e-01 16 67847580 67847811 232 - 0.404 0.389 -0.085