ENSG00000101901

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000394780 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding protein_coding 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 4.777828 3.905555 6.808609 0.3882899 0.6139200 0.8002609 0.16112083 0.14166667 0.16680000 0.02513333 7.343632e-01 3.503992e-35 FALSE TRUE
ENST00000461669 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding processed_transcript 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 1.308857 3.465370 0.000000 0.4739066 0.0000000 -8.4410228 0.05263333 0.12466667 0.00000000 -0.12466667 3.503992e-35 3.503992e-35 FALSE TRUE
ENST00000468657 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding nonsense_mediated_decay 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 2.286482 1.894759 1.568932 1.4868854 0.9500916 -0.2706589 0.07728333 0.06606667 0.03930000 -0.02676667 1.000000e+00 3.503992e-35   FALSE
ENST00000482374 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding nonsense_mediated_decay 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 1.677951 1.018624 3.965695 0.4198069 0.3949763 1.9504910 0.04869167 0.03756667 0.09586667 0.05830000 1.531167e-01 3.503992e-35   FALSE
ENST00000482742 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding protein_coding 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 6.200559 7.630196 7.425560 0.7693256 0.4842401 -0.0391684 0.20633750 0.27726667 0.18153333 -0.09573333 1.345445e-01 3.503992e-35   FALSE
ENST00000622997 ENSG00000101901 HEK293_OSMI2_2hA HEK293_TMG_2hB ALG13 protein_coding nonsense_mediated_decay 29.96382 27.64483 41.19681 0.6763792 1.59869 0.575351 3.694742 3.008418 7.487849 1.6014003 1.2563417 1.3126841 0.10996667 0.11166667 0.18003333 0.06836667 7.529590e-01 3.503992e-35   FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000101901 E001 0.0000000       X 111665811 111665971 161 +      
ENSG00000101901 E002 0.0000000       X 111680583 111681099 517 +      
ENSG00000101901 E003 0.0000000       X 111681100 111681117 18 +      
ENSG00000101901 E004 3.9544512 0.0041742915 4.423306e-01 5.839637e-01 X 111681118 111681169 52 + 0.630 0.754 0.519
ENSG00000101901 E005 3.9544512 0.0041742915 4.423306e-01 5.839637e-01 X 111681170 111681175 6 + 0.630 0.754 0.519
ENSG00000101901 E006 4.5488570 0.0049708688 3.157354e-01 4.585045e-01 X 111681176 111681178 3 + 0.657 0.810 0.627
ENSG00000101901 E007 9.8320111 0.0025344778 6.533549e-01 7.638615e-01 X 111681179 111681188 10 + 0.999 1.061 0.229
ENSG00000101901 E008 14.9360001 0.0012059733 4.951248e-01 6.319768e-01 X 111681189 111681191 3 + 1.164 1.240 0.267
ENSG00000101901 E009 17.8189998 0.0013319770 5.477506e-01 6.777462e-01 X 111681192 111681193 2 + 1.238 1.303 0.227
ENSG00000101901 E010 18.0413900 0.0010105822 5.330192e-01 6.652691e-01 X 111681194 111681194 1 + 1.245 1.311 0.232
ENSG00000101901 E011 22.6037036 0.0036473766 9.697394e-01 9.850444e-01 X 111681195 111681197 3 + 1.362 1.380 0.062
ENSG00000101901 E012 31.0480193 0.0006780341 9.764903e-01 9.893106e-01 X 111681198 111681203 6 + 1.498 1.513 0.051
ENSG00000101901 E013 32.1657829 0.0006315659 9.826559e-01 9.932253e-01 X 111681204 111681206 3 + 1.512 1.528 0.053
ENSG00000101901 E014 46.6912622 0.0004763730 7.758258e-01 8.556246e-01 X 111681207 111681215 9 + 1.677 1.679 0.007
ENSG00000101901 E015 57.0132910 0.0007265200 8.583574e-01 9.125988e-01 X 111681216 111681233 18 + 1.752 1.777 0.084
ENSG00000101901 E016 98.6542658 0.0025000977 5.994429e-01 7.208184e-01 X 111681234 111681266 33 + 1.982 2.017 0.121
ENSG00000101901 E017 116.6242284 0.0019759838 5.443850e-01 6.748689e-01 X 111681267 111681299 33 + 2.075 2.067 -0.027
ENSG00000101901 E018 99.9595925 0.0007076007 7.852177e-01 8.623113e-01 X 111681300 111681424 125 + 2.002 2.009 0.024
ENSG00000101901 E019 0.4783925 0.0221280522 7.730006e-01 8.534872e-01 X 111681657 111681662 6 + 0.189 0.143 -0.481
ENSG00000101901 E020 24.6815075 0.0130660108 6.518250e-03 1.996932e-02 X 111681663 111681812 150 + 1.271 1.521 0.864
ENSG00000101901 E021 16.3159877 0.0439118780 1.341051e-01 2.398608e-01 X 111681813 111681826 14 + 1.130 1.332 0.715
ENSG00000101901 E022 184.7961870 0.0004408434 9.239530e-01 9.561063e-01 X 111682132 111682235 104 + 2.259 2.278 0.062
ENSG00000101901 E023 177.0560948 0.0002380679 1.233068e-01 2.246833e-01 X 111682236 111682294 59 + 2.261 2.236 -0.082
ENSG00000101901 E024 0.5996172 0.2884733792 8.344498e-01 8.963712e-01 X 111682295 111682300 6 + 0.189 0.245 0.472
ENSG00000101901 E025 252.9995747 0.0001952946 7.442176e-01 8.326186e-01 X 111684965 111685103 139 + 2.400 2.410 0.033
ENSG00000101901 E026 2.7593854 0.0060520352 4.516995e-01 5.926280e-01 X 111685104 111685278 175 + 0.630 0.523 -0.483
ENSG00000101901 E027 22.1372170 0.0008900005 9.332918e-01 9.619711e-01 X 111686137 111686174 38 + 1.362 1.373 0.036
ENSG00000101901 E028 126.9711576 0.0002512840 3.284971e-04 1.494831e-03 X 111687887 111688048 162 + 2.046 2.175 0.433
ENSG00000101901 E029 11.9360541 0.0015428767 2.635500e-01 4.014695e-01 X 111688049 111688053 5 + 1.054 1.177 0.440
ENSG00000101901 E030 117.2265817 0.0053870745 4.311350e-02 9.676022e-02 X 111688054 111688726 673 + 2.108 2.034 -0.247
ENSG00000101901 E031 16.7292702 0.0233813654 7.786704e-01 8.575958e-01 X 111688727 111689086 360 + 1.258 1.259 0.003
ENSG00000101901 E032 7.9117629 0.0025100340 5.667509e-01 6.936491e-01 X 111689087 111689197 111 + 0.974 0.924 -0.188
ENSG00000101901 E033 7.2500531 0.0054542933 8.810503e-01 9.277443e-01 X 111689198 111690172 975 + 0.892 0.925 0.124
ENSG00000101901 E034 77.3372992 0.0010996560 2.134074e-07 2.034533e-06 X 111708027 111708393 367 + 1.978 1.768 -0.707
ENSG00000101901 E035 44.0915350 0.0050751906 3.570790e-08 3.959702e-07 X 111708965 111709048 84 + 1.780 1.432 -1.186
ENSG00000101901 E036 37.8472372 0.0013890331 1.623312e-08 1.924598e-07 X 111711675 111711725 51 + 1.712 1.380 -1.139
ENSG00000101901 E037 36.4395860 0.0005650993 7.779810e-06 5.299564e-05 X 111712484 111712530 47 + 1.672 1.420 -0.860
ENSG00000101901 E038 32.2320523 0.0006174742 2.166720e-02 5.498636e-02 X 111713225 111713241 17 + 1.576 1.451 -0.430
ENSG00000101901 E039 40.6980985 0.0031759980 4.017739e-03 1.319161e-02 X 111713242 111713297 56 + 1.689 1.531 -0.537
ENSG00000101901 E040 0.2214452 0.0396352961 3.559928e-01   X 111714246 111714289 44 + 0.000 0.143 10.424
ENSG00000101901 E041 1.3402425 0.0293576317 2.215331e-01 3.522378e-01 X 111716953 111717004 52 + 0.463 0.250 -1.295
ENSG00000101901 E042 30.4300705 0.0008290665 1.729694e-02 4.559799e-02 X 111717846 111717878 33 + 1.560 1.426 -0.461
ENSG00000101901 E043 34.7086471 0.0005733069 5.191554e-04 2.231681e-03 X 111717879 111717927 49 + 1.632 1.439 -0.661
ENSG00000101901 E044 57.3586207 0.0004370002 2.721311e-03 9.436497e-03 X 111718112 111718218 107 + 1.818 1.693 -0.422
ENSG00000101901 E045 50.1365051 0.0004623731 6.703525e-03 2.045483e-02 X 111718219 111718274 56 + 1.758 1.638 -0.407
ENSG00000101901 E046 54.0659408 0.0029172410 2.262026e-02 5.696318e-02 X 111720095 111720170 76 + 1.786 1.676 -0.374
ENSG00000101901 E047 65.0225619 0.0060667226 3.414951e-02 8.004952e-02 X 111721603 111721711 109 + 1.864 1.752 -0.376
ENSG00000101901 E048 53.2323211 0.0051456982 2.116421e-03 7.585267e-03 X 111722793 111722857 65 + 1.801 1.628 -0.587
ENSG00000101901 E049 71.6024237 0.0007246349 6.966352e-06 4.800329e-05 X 111723798 111723898 101 + 1.932 1.751 -0.612
ENSG00000101901 E050 73.9978887 0.0008184874 5.347447e-04 2.289810e-03 X 111724934 111725061 128 + 1.929 1.796 -0.449
ENSG00000101901 E051 89.4534844 0.0002884203 2.301118e-02 5.777330e-02 X 111726809 111727055 247 + 1.988 1.920 -0.229
ENSG00000101901 E052 45.7017066 0.0005080275 6.759286e-02 1.393513e-01 X 111727332 111727418 87 + 1.708 1.630 -0.264
ENSG00000101901 E053 31.1610795 0.0006430528 7.237821e-03 2.184178e-02 X 111727419 111727445 27 + 1.573 1.420 -0.526
ENSG00000101901 E054 32.8172846 0.0006517173 4.553976e-02 1.011878e-01 X 111727614 111727642 29 + 1.580 1.474 -0.360
ENSG00000101901 E055 70.2616551 0.0003770029 1.205138e-01 2.206958e-01 X 111727643 111727770 128 + 1.878 1.830 -0.162
ENSG00000101901 E056 74.7732022 0.0003516546 6.390549e-01 7.525313e-01 X 111728185 111728305 121 + 1.879 1.877 -0.007
ENSG00000101901 E057 51.5757291 0.0012608136 5.292236e-01 6.620344e-01 X 111730395 111730427 33 + 1.696 1.744 0.164
ENSG00000101901 E058 38.9970002 0.0008563061 1.001159e-01 1.906523e-01 X 111730525 111730535 11 + 1.547 1.657 0.374
ENSG00000101901 E059 47.6094149 0.0004975048 6.907806e-02 1.418482e-01 X 111730536 111730580 45 + 1.632 1.741 0.370
ENSG00000101901 E060 0.7416694 0.0180652862 3.029967e-01 4.449254e-01 X 111734368 111734376 9 + 0.320 0.143 -1.483
ENSG00000101901 E061 1.3412866 0.2998865563 6.261118e-01 7.421091e-01 X 111734377 111734434 58 + 0.421 0.327 -0.545
ENSG00000101901 E062 51.4432709 0.0004640028 2.925429e-02 7.049809e-02 X 111735051 111735122 72 + 1.661 1.785 0.418
ENSG00000101901 E063 49.5014389 0.0004329126 8.400702e-02 1.658180e-01 X 111736714 111736834 121 + 1.654 1.756 0.348
ENSG00000101901 E064 22.3003190 0.0032937707 3.916040e-01 5.355196e-01 X 111736835 111736846 12 + 1.330 1.413 0.287
ENSG00000101901 E065 21.6259528 0.0098914076 4.953664e-01 6.321830e-01 X 111736847 111736879 33 + 1.319 1.398 0.275
ENSG00000101901 E066 0.1451727 0.0427827605 6.625330e-01   X 111736880 111736933 54 + 0.104 0.000 -10.526
ENSG00000101901 E067 0.1451727 0.0427827605 6.625330e-01   X 111736982 111737026 45 + 0.104 0.000 -10.526
ENSG00000101901 E068 0.1451727 0.0427827605 6.625330e-01   X 111737027 111737081 55 + 0.104 0.000 -10.526
ENSG00000101901 E069 0.8148214 0.0197326698 3.068442e-01 4.490314e-01 X 111743800 111743854 55 + 0.320 0.143 -1.480
ENSG00000101901 E070 30.3329454 0.0007874219 8.824216e-01 9.287134e-01 X 111744668 111744845 178 + 1.494 1.502 0.027
ENSG00000101901 E071 33.7330014 0.0076476648 4.983947e-01 6.348588e-01 X 111744846 111744904 59 + 1.505 1.571 0.226
ENSG00000101901 E072 0.6695470 0.0169048826 1.883783e-01 3.116889e-01 X 111752746 111752789 44 + 0.104 0.336 2.102
ENSG00000101901 E073 40.0550090 0.0168864304 5.650401e-01 6.922127e-01 X 111752790 111752830 41 + 1.576 1.642 0.224
ENSG00000101901 E074 2.0136651 0.0110121377 1.618227e-01 2.775077e-01 X 111752831 111753166 336 + 0.570 0.336 -1.217
ENSG00000101901 E075 1.1866493 0.1877923700 9.180485e-01 9.522121e-01 X 111757278 111757587 310 + 0.320 0.340 0.121
ENSG00000101901 E076 88.9006124 0.0005641824 2.249667e-06 1.730310e-05 X 111757588 111757762 175 + 1.852 2.050 0.666
ENSG00000101901 E077 63.1503559 0.0051195365 1.743860e-05 1.096297e-04 X 111759734 111759811 78 + 1.674 1.930 0.863
ENSG00000101901 E078 109.7133362 0.0094716912 2.821511e-04 1.307199e-03 X 111759812 111759991 180 + 1.928 2.156 0.764
ENSG00000101901 E079 158.7201854 0.0081230623 2.876893e-09 3.918461e-08 X 111759992 111760389 398 + 2.025 2.352 1.091
ENSG00000101901 E080 84.7175458 0.0160067557 9.188290e-07 7.686880e-06 X 111760390 111760649 260 + 1.715 2.104 1.310
ENSG00000101901 E081 5.1473178 0.0103500533 8.715226e-01 9.213579e-01 X 111764510 111764583 74 + 0.770 0.809 0.154