ENSG00000101639

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000325971 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding protein_coding 4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.4337809 0.00000000 0.7072619 0.00000000 0.36839076 6.1644282 0.06840833 0.00000000 0.11200000 0.11200000 3.564137e-01 2.844519e-21 FALSE TRUE
ENST00000506447 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding protein_coding 4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.3335026 0.00000000 0.4328125 0.00000000 0.43281254 5.4686242 0.06423750 0.00000000 0.06563333 0.06563333 1.000000e+00 2.844519e-21 FALSE TRUE
ENST00000508539 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding processed_transcript 4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.6622123 0.32248974 0.5250692 0.17911934 0.09451173 0.6864156 0.15201667 0.13696667 0.07923333 -0.05773333 8.836338e-01 2.844519e-21 TRUE FALSE
ENST00000513183 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding processed_transcript 4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.3400792 0.37614381 0.2944369 0.20055692 0.17506663 -0.3429951 0.09179583 0.16423333 0.04506667 -0.11916667 5.912288e-01 2.844519e-21   FALSE
ENST00000540847 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding processed_transcript 4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.1172811 0.19340305 0.1269476 0.09706684 0.06489855 -0.5707174 0.03475417 0.09800000 0.01876667 -0.07923333 5.223904e-01 2.844519e-21 FALSE TRUE
MSTRG.15531.1 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding   4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.4332782 0.03229424 0.6027150 0.03229424 0.26128708 3.8566833 0.09047917 0.01786667 0.08990000 0.07203333 3.325438e-01 2.844519e-21 FALSE TRUE
MSTRG.15531.13 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding   4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 0.3349647 0.79689296 0.0000000 0.10535897 0.00000000 -6.3343054 0.13540000 0.37110000 0.00000000 -0.37110000 2.844519e-21 2.844519e-21 FALSE TRUE
MSTRG.15531.6 ENSG00000101639 HEK293_OSMI2_2hA HEK293_TMG_2hB CEP192 protein_coding   4.533004 2.152736 6.570539 0.1879554 0.2463813 1.605349 1.1425643 0.22421636 2.7506711 0.11661838 0.40358699 3.5591052 0.19903333 0.10500000 0.41913333 0.31413333 1.227263e-01 2.844519e-21 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000101639 E001 0.7320925 0.0539672143 4.551849e-01 5.957198e-01 18 12991321 12991361 41 + 0.230 0.000 -10.861
ENSG00000101639 E002 0.7320925 0.0539672143 4.551849e-01 5.957198e-01 18 12991362 12991364 3 + 0.230 0.000 -13.000
ENSG00000101639 E003 0.8793415 0.1610377067 4.012550e-01 5.449521e-01 18 12991365 12991367 3 + 0.264 0.000 -13.159
ENSG00000101639 E004 1.9573392 0.0548758628 4.216680e-01 5.648088e-01 18 12991368 12991376 9 + 0.428 0.245 -1.150
ENSG00000101639 E005 8.0081525 0.0052422762 6.699139e-01 7.765409e-01 18 12991377 12991437 61 + 0.863 0.799 -0.249
ENSG00000101639 E006 14.5708898 0.0012463721 1.266287e-02 3.511692e-02 18 12999421 12999588 168 + 1.134 0.799 -1.251
ENSG00000101639 E007 0.1817044 0.0391296160 7.099191e-02   18 13000312 13000486 175 + 0.000 0.245 13.756
ENSG00000101639 E008 15.7592531 0.0329035381 9.956664e-04 3.942934e-03 18 13001457 13001582 126 + 1.184 0.605 -2.238
ENSG00000101639 E009 9.8154930 0.0483076867 7.076372e-04 2.926366e-03 18 13008456 13008499 44 + 1.005 0.245 -3.589
ENSG00000101639 E010 15.5177757 0.0240516117 2.686920e-05 1.616786e-04 18 13008500 13008631 132 + 1.184 0.401 -3.237
ENSG00000101639 E011 13.3720291 0.0016176635 1.561739e-01 2.700377e-01 18 13012973 13013025 53 + 1.076 0.893 -0.681
ENSG00000101639 E012 17.4755778 0.0020778497 1.318897e-02 3.634924e-02 18 13015328 13015448 121 + 1.200 0.893 -1.124
ENSG00000101639 E013 19.1404847 0.0022434767 4.674789e-04 2.035592e-03 18 13017188 13017336 149 + 1.250 0.799 -1.665
ENSG00000101639 E014 17.6403092 0.0010120840 1.678213e-05 1.058927e-04 18 13018480 13018615 136 + 1.229 0.605 -2.399
ENSG00000101639 E015 11.0442876 0.0030213910 7.674266e-03 2.296352e-02 18 13019082 13019123 42 + 1.028 0.605 -1.674
ENSG00000101639 E016 11.5853367 0.0016685748 1.662370e-02 4.410737e-02 18 13019124 13019170 47 + 1.039 0.680 -1.393
ENSG00000101639 E017 11.8852445 0.0459362162 1.594781e-01 2.744258e-01 18 13019171 13019206 36 + 1.034 0.806 -0.862
ENSG00000101639 E018 17.0107491 0.0031055430 4.394032e-02 9.827591e-02 18 13029663 13029786 124 + 1.180 0.933 -0.900
ENSG00000101639 E019 9.6836310 0.0100333968 7.385598e-02 1.496753e-01 18 13029787 13029812 26 + 0.966 0.680 -1.123
ENSG00000101639 E020 24.6894728 0.0008296504 1.494264e-03 5.617301e-03 18 13029813 13030002 190 + 1.345 1.003 -1.219
ENSG00000101639 E021 19.7180932 0.0322034490 5.568926e-03 1.747236e-02 18 13030465 13030608 144 + 1.261 0.850 -1.503
ENSG00000101639 E022 9.9080501 0.0795099663 2.381813e-01 3.720297e-01 18 13037237 13037301 65 + 0.968 0.747 -0.855
ENSG00000101639 E023 10.4834172 0.0042907805 3.857022e-02 8.840162e-02 18 13038370 13038514 145 + 0.998 0.680 -1.244
ENSG00000101639 E024 6.5244935 0.0025356879 2.123630e-04 1.016821e-03 18 13038515 13038579 65 + 0.855 0.000 -15.558
ENSG00000101639 E025 13.5833267 0.0087899045 2.534870e-04 1.189732e-03 18 13040830 13040956 127 + 1.124 0.515 -2.439
ENSG00000101639 E026 18.5031538 0.0021907028 8.721974e-06 5.874402e-05 18 13042204 13042334 131 + 1.250 0.605 -2.473
ENSG00000101639 E027 66.5035940 0.0003476996 1.236064e-11 2.535665e-10 18 13048859 13049681 823 + 1.777 1.282 -1.695
ENSG00000101639 E028 14.8257346 0.0012857871 1.030038e-02 2.950604e-02 18 13049765 13049891 127 + 1.142 0.799 -1.282
ENSG00000101639 E029 16.5097809 0.0010827296 8.395102e-03 2.477669e-02 18 13052919 13053090 172 + 1.184 0.848 -1.239
ENSG00000101639 E030 31.5782598 0.0021749773 2.686813e-04 1.252212e-03 18 13055780 13056046 267 + 1.452 1.092 -1.267
ENSG00000101639 E031 40.5438256 0.0005182467 1.271879e-04 6.464912e-04 18 13056047 13056527 481 + 1.551 1.228 -1.122
ENSG00000101639 E032 15.1931902 0.0013091569 9.008235e-01 9.407533e-01 18 13056528 13056604 77 + 1.106 1.092 -0.051
ENSG00000101639 E033 12.5849063 0.0020731646 8.074833e-01 8.776853e-01 18 13056605 13056630 26 + 1.033 1.003 -0.110
ENSG00000101639 E034 12.5588700 0.0033923675 5.825294e-01 7.068770e-01 18 13056631 13056698 68 + 1.039 0.970 -0.256
ENSG00000101639 E035 17.7611101 0.0010411707 9.777721e-01 9.901856e-01 18 13057585 13057733 149 + 1.168 1.165 -0.011
ENSG00000101639 E036 0.0000000       18 13057734 13058293 560 +      
ENSG00000101639 E037 0.1515154 0.0429472169 1.000000e+00   18 13058294 13058435 142 + 0.057 0.000 -10.815
ENSG00000101639 E038 0.4418608 0.0260152099 9.630547e-01 9.806623e-01 18 13058436 13059081 646 + 0.152 0.000 -12.322
ENSG00000101639 E039 16.2722518 0.0157182369 3.705426e-01 5.149741e-01 18 13059082 13059181 100 + 1.151 1.035 -0.420
ENSG00000101639 E040 23.7561201 0.0009620420 1.348709e-02 3.705013e-02 18 13059182 13059312 131 + 1.323 1.064 -0.919
ENSG00000101639 E041 0.0000000       18 13059313 13059314 2 +      
ENSG00000101639 E042 24.8690310 0.0009628011 9.515301e-01 9.736759e-01 18 13067831 13067956 126 + 1.305 1.299 -0.020
ENSG00000101639 E043 26.8853041 0.0091630069 2.082477e-01 3.363837e-01 18 13068094 13068237 144 + 1.358 1.228 -0.454
ENSG00000101639 E044 18.0155561 0.0055441232 2.312180e-02 5.800182e-02 18 13068359 13068414 56 + 1.215 0.933 -1.025
ENSG00000101639 E045 13.1264886 0.0035335012 4.533139e-03 1.463588e-02 18 13068415 13068422 8 + 1.101 0.680 -1.619
ENSG00000101639 E046 30.8642921 0.0012409362 2.877533e-02 6.955267e-02 18 13068852 13068991 140 + 1.425 1.228 -0.689
ENSG00000101639 E047 19.7045016 0.0009684191 4.722863e-01 6.113271e-01 18 13069089 13069181 93 + 1.196 1.265 0.243
ENSG00000101639 E048 19.2812136 0.0009815716 7.900727e-02 1.579237e-01 18 13069738 13069856 119 + 1.168 1.331 0.574
ENSG00000101639 E049 29.3160558 0.0040654457 2.297643e-01 3.621740e-01 18 13071039 13071212 174 + 1.351 1.451 0.349
ENSG00000101639 E050 28.6899276 0.0079290571 9.974597e-01 1.000000e+00 18 13072755 13072845 91 + 1.361 1.362 0.001
ENSG00000101639 E051 26.1031380 0.0007846418 5.883460e-01 7.115476e-01 18 13073009 13073115 107 + 1.331 1.282 -0.171
ENSG00000101639 E052 22.6281540 0.0062454365 6.356377e-01 7.498821e-01 18 13073116 13073185 70 + 1.254 1.300 0.162
ENSG00000101639 E053 25.7364837 0.0061165776 2.905821e-01 4.314020e-01 18 13087017 13087148 132 + 1.334 1.229 -0.370
ENSG00000101639 E054 21.4108640 0.0036271523 6.758200e-01 7.809644e-01 18 13087149 13087277 129 + 1.250 1.208 -0.150
ENSG00000101639 E055 20.6567836 0.0010470939 4.728887e-01 6.119270e-01 18 13087531 13087646 116 + 1.215 1.282 0.238
ENSG00000101639 E056 0.7320925 0.0539672143 4.551849e-01 5.957198e-01 18 13088754 13088904 151 + 0.230 0.000 -13.000
ENSG00000101639 E057 24.8612663 0.0014817087 5.450689e-01 6.754735e-01 18 13089456 13089565 110 + 1.293 1.346 0.186
ENSG00000101639 E058 29.6634579 0.0007778941 2.073057e-02 5.301921e-02 18 13092377 13092527 151 + 1.340 1.516 0.607
ENSG00000101639 E059 30.9840816 0.0006596351 7.116432e-02 1.452678e-01 18 13095503 13095681 179 + 1.369 1.505 0.469
ENSG00000101639 E060 0.0000000       18 13095682 13095685 4 +      
ENSG00000101639 E061 28.1428936 0.0007025540 3.543092e-02 8.247972e-02 18 13096184 13096307 124 + 1.320 1.484 0.570
ENSG00000101639 E062 29.3676572 0.0008421155 3.133655e-03 1.065796e-02 18 13099476 13099581 106 + 1.323 1.545 0.766
ENSG00000101639 E063 44.3384558 0.0039457708 2.272006e-02 5.717195e-02 18 13100305 13100512 208 + 1.510 1.668 0.539
ENSG00000101639 E064 28.8543969 0.0059108217 2.874607e-06 2.159683e-05 18 13103509 13103588 80 + 1.270 1.638 1.268
ENSG00000101639 E065 0.3030308 0.3829947285 1.000000e+00   18 13103875 13103967 93 + 0.108 0.000 -11.450
ENSG00000101639 E066 28.6404261 0.0054125918 1.968712e-06 1.533643e-05 18 13104984 13105079 96 + 1.267 1.638 1.278
ENSG00000101639 E067 30.2805764 0.0011604459 6.869576e-08 7.201309e-07 18 13113586 13113705 120 + 1.286 1.667 1.308
ENSG00000101639 E068 29.6570399 0.0007050063 1.061374e-06 8.759111e-06 18 13114130 13114251 122 + 1.290 1.637 1.197
ENSG00000101639 E069 11.5332004 0.0014994075 7.774761e-04 3.178200e-03 18 13116374 13116376 3 + 0.903 1.265 1.314
ENSG00000101639 E070 18.5825286 0.0010221565 1.778294e-03 6.530443e-03 18 13116377 13116403 27 + 1.120 1.402 0.991
ENSG00000101639 E071 32.6906694 0.0006318946 1.752845e-05 1.101251e-04 18 13116404 13116503 100 + 1.348 1.645 1.019
ENSG00000101639 E072 27.7304204 0.0007446653 1.039934e-08 1.277559e-07 18 13117585 13117643 59 + 1.240 1.652 1.421
ENSG00000101639 E073 3.8434947 0.2958700645 4.088905e-02 9.268141e-02 18 13124487 13124631 145 + 0.428 0.995 2.403
ENSG00000101639 E074 37.7644615 0.0083266073 1.976149e-17 9.292019e-16 18 13124632 13125052 421 + 1.290 1.893 2.060