ENSG00000101266

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000349736 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 21.826449 25.427968 21.4819293 5.5984812 2.4974605 -0.2431884 0.2854375 0.41266667 0.190800000 -0.2218667 4.466019e-03 3.550561e-06 FALSE TRUE
ENST00000400217 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 15.746444 4.450693 25.2761037 2.1309723 0.9624720 2.5030051 0.1630542 0.07426667 0.224466667 0.1502000 3.589415e-02 3.550561e-06 FALSE TRUE
ENST00000642689 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 2.987444 8.899074 0.2197397 1.4940138 0.2197397 -5.2772030 0.0479625 0.15260000 0.001933333 -0.1506667 1.134310e-03 3.550561e-06 FALSE TRUE
ENST00000644885 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 7.689645 10.312661 6.4554191 2.7288328 4.2146236 -0.6749991 0.1053083 0.16863333 0.057500000 -0.1111333 5.528280e-01 3.550561e-06 FALSE TRUE
ENST00000645234 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 11.378813 1.533958 15.3618799 1.5339584 6.0247185 3.3155878 0.1233375 0.02470000 0.136366667 0.1116667 1.236110e-01 3.550561e-06 FALSE TRUE
ENST00000645260 ENSG00000101266 HEK293_OSMI2_2hA HEK293_TMG_2hB CSNK2A1 protein_coding protein_coding 84.61664 60.54482 112.5735 6.205347 0.8107058 0.8946813 10.580683 2.391089 19.7726801 0.5040845 1.1923928 3.0424774 0.1126208 0.04040000 0.175666667 0.1352667 3.550561e-06 3.550561e-06 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000101266 E001 0.7770552 0.0156039756 4.382569e-01 5.801501e-01 20 472498 472507 10 - 0.192 0.331 1.045
ENSG00000101266 E002 65.9935853 0.0003810912 1.100235e-01 2.055747e-01 20 472508 473260 753 - 1.796 1.871 0.252
ENSG00000101266 E003 24.8435581 0.0015622746 7.155446e-01 8.114366e-01 20 473261 473336 76 - 1.405 1.436 0.109
ENSG00000101266 E004 76.5306389 0.0003288709 1.916721e-01 3.158556e-01 20 473337 473950 614 - 1.917 1.869 -0.161
ENSG00000101266 E005 63.0848773 0.0033068160 7.096750e-01 8.069939e-01 20 473951 478464 4514 - 1.819 1.802 -0.058
ENSG00000101266 E006 4.5891797 0.0086831915 6.524637e-01 7.631681e-01 20 478465 478760 296 - 0.777 0.716 -0.248
ENSG00000101266 E007 57.5078887 0.0201605962 1.337275e-01 2.393345e-01 20 478761 481109 2349 - 1.698 1.847 0.506
ENSG00000101266 E008 12.6560227 0.0030169673 3.473380e-03 1.164846e-02 20 481110 481146 37 - 0.994 1.277 1.014
ENSG00000101266 E009 16.2670574 0.0195827367 9.115795e-01 9.478843e-01 20 481147 481149 3 - 1.239 1.254 0.054
ENSG00000101266 E010 22.1317389 0.0121035652 2.656128e-01 4.036867e-01 20 481150 481154 5 - 1.321 1.421 0.348
ENSG00000101266 E011 64.4313030 0.0118751525 2.335329e-03 8.260597e-03 20 481155 481191 37 - 1.707 1.926 0.741
ENSG00000101266 E012 400.3352926 0.0111002140 1.734464e-04 8.502536e-04 20 481192 481622 431 - 2.489 2.708 0.728
ENSG00000101266 E013 1302.9937706 0.0069229022 6.547777e-01 7.648642e-01 20 481623 482710 1088 - 3.105 3.127 0.075
ENSG00000101266 E014 84.3614130 0.0058333768 9.769713e-01 9.896285e-01 20 482711 482714 4 - 1.934 1.943 0.033
ENSG00000101266 E015 84.4065662 0.0062033333 9.336811e-01 9.622192e-01 20 482715 482721 7 - 1.935 1.941 0.021
ENSG00000101266 E016 80.6247204 0.0055904458 9.003909e-01 9.404468e-01 20 482722 482723 2 - 1.916 1.921 0.015
ENSG00000101266 E017 113.6770797 0.0056010894 3.083711e-01 4.506428e-01 20 482724 482731 8 - 2.038 2.093 0.185
ENSG00000101266 E018 101.6479178 0.0082319757 1.608277e-01 2.762038e-01 20 482732 482735 4 - 1.975 2.058 0.278
ENSG00000101266 E019 102.5742972 0.0098662067 1.645717e-01 2.811225e-01 20 482736 482741 6 - 1.976 2.064 0.294
ENSG00000101266 E020 104.1324548 0.0118098532 1.042016e-01 1.968930e-01 20 482742 482747 6 - 1.971 2.080 0.366
ENSG00000101266 E021 152.0473773 0.0080489888 8.098604e-03 2.403020e-02 20 482748 482776 29 - 2.116 2.257 0.471
ENSG00000101266 E022 160.1531434 0.0084138970 2.492595e-02 6.172176e-02 20 482777 482781 5 - 2.150 2.269 0.397
ENSG00000101266 E023 398.5756740 0.0037030265 3.978243e-04 1.765936e-03 20 482782 482856 75 - 2.541 2.666 0.414
ENSG00000101266 E024 283.6581470 0.0030717633 4.112503e-05 2.364065e-04 20 482857 482864 8 - 2.384 2.530 0.485
ENSG00000101266 E025 283.1159571 0.0029053667 3.821991e-05 2.213791e-04 20 482865 482886 22 - 2.384 2.528 0.480
ENSG00000101266 E026 338.8632639 0.0001958865 1.260466e-12 3.043868e-11 20 482887 482921 35 - 2.463 2.609 0.488
ENSG00000101266 E027 1247.8594293 0.0012317456 4.027721e-11 7.589414e-10 20 482922 483389 468 - 3.037 3.160 0.410
ENSG00000101266 E028 737.5153506 0.0017587016 1.911616e-01 3.151816e-01 20 483390 483764 375 - 2.857 2.885 0.091
ENSG00000101266 E029 126.5871800 0.0066020837 6.507873e-01 7.617910e-01 20 483765 483790 26 - 2.100 2.117 0.058
ENSG00000101266 E030 326.2513890 0.0023045850 8.134927e-03 2.412740e-02 20 483791 483927 137 - 2.479 2.557 0.261
ENSG00000101266 E031 575.8220189 0.0027503367 3.382556e-01 4.821231e-01 20 483928 484076 149 - 2.751 2.775 0.080
ENSG00000101266 E032 0.7416694 0.0177322099 2.987657e-01 4.402429e-01 20 484077 484090 14 - 0.324 0.140 -1.539
ENSG00000101266 E033 1.4873777 0.2517478480 2.561282e-01 3.930811e-01 20 486364 486375 12 - 0.508 0.242 -1.578
ENSG00000101266 E034 556.5293300 0.0019082083 9.649333e-01 9.819077e-01 20 486376 486462 87 - 2.748 2.749 0.002
ENSG00000101266 E035 2.2185623 0.0067426283 9.712571e-01 9.860547e-01 20 486463 487426 964 - 0.508 0.517 0.046
ENSG00000101266 E036 637.3056744 0.0017682967 4.477695e-01 5.891324e-01 20 487427 487575 149 - 2.816 2.794 -0.073
ENSG00000101266 E037 2.8516794 0.0211411935 4.657322e-01 6.053749e-01 20 487576 488677 1102 - 0.636 0.517 -0.539
ENSG00000101266 E038 647.5192637 0.0012045523 1.813728e-01 3.029682e-01 20 488678 488778 101 - 2.828 2.796 -0.108
ENSG00000101266 E039 10.9173507 0.0263859883 4.837713e-02 1.062929e-01 20 488779 489247 469 - 1.172 0.918 -0.930
ENSG00000101266 E040 6.3074790 0.0074267728 5.538455e-01 6.829235e-01 20 489503 489779 277 - 0.899 0.828 -0.276
ENSG00000101266 E041 615.1736729 0.0028386770 5.915883e-02 1.251923e-01 20 489780 489881 102 - 2.819 2.755 -0.212
ENSG00000101266 E042 440.9981907 0.0042351945 4.965868e-02 1.085538e-01 20 492254 492338 85 - 2.681 2.604 -0.256
ENSG00000101266 E043 282.9227127 0.0046338823 3.827166e-02 8.785762e-02 20 492339 492364 26 - 2.493 2.406 -0.292
ENSG00000101266 E044 1.3963420 0.2629450260 3.828984e-01 5.270687e-01 20 492365 492717 353 - 0.468 0.248 -1.336
ENSG00000101266 E045 0.1472490 0.0434983405 6.690769e-01   20 494131 494224 94 - 0.106 0.000 -12.241
ENSG00000101266 E046 2.8204488 0.0058137282 2.611301e-04 1.221188e-03 20 494225 495718 1494 - 0.778 0.140 -3.708
ENSG00000101266 E047 242.7691356 0.0054095340 1.372726e-01 2.442762e-01 20 495719 495731 13 - 2.419 2.350 -0.230
ENSG00000101266 E048 352.9131214 0.0065032860 7.673270e-02 1.542598e-01 20 495732 495796 65 - 2.587 2.502 -0.284
ENSG00000101266 E049 248.6875672 0.0037020073 1.149015e-03 4.467929e-03 20 495797 495802 6 - 2.453 2.326 -0.424
ENSG00000101266 E050 1.6347510 0.0869964325 6.399712e-01 7.533000e-01 20 495803 496728 926 - 0.378 0.463 0.457
ENSG00000101266 E051 283.5283658 0.0026594204 2.900056e-04 1.339363e-03 20 497721 497746 26 - 2.509 2.386 -0.410
ENSG00000101266 E052 328.7798170 0.0006901247 4.274347e-09 5.635088e-08 20 497747 497780 34 - 2.579 2.443 -0.453
ENSG00000101266 E053 0.9556140 0.3053313710 3.620884e-01 5.064900e-01 20 497781 498196 416 - 0.377 0.143 -1.827
ENSG00000101266 E054 0.6966155 0.0172671820 1.892876e-01 3.128351e-01 20 498358 498454 97 - 0.106 0.332 2.048
ENSG00000101266 E055 1.3349319 0.0099100782 4.174322e-02 9.426387e-02 20 498455 499254 800 - 0.508 0.140 -2.539
ENSG00000101266 E056 346.7838617 0.0030818030 1.791978e-05 1.123638e-04 20 499255 499305 51 - 2.605 2.460 -0.482
ENSG00000101266 E057 1.8005372 0.0086680464 5.242218e-01 6.578365e-01 20 499306 499524 219 - 0.508 0.402 -0.540
ENSG00000101266 E058 2.0326933 0.0073165641 1.515778e-01 2.638123e-01 20 499525 499573 49 - 0.577 0.332 -1.274
ENSG00000101266 E059 1.1909051 0.0109811001 6.261633e-03 1.929862e-02 20 499574 499630 57 - 0.508 0.000 -15.241
ENSG00000101266 E060 0.8232405 0.1830989368 3.906338e-01 5.346019e-01 20 499631 499832 202 - 0.325 0.142 -1.524
ENSG00000101266 E061 245.9152489 0.0062548527 2.237664e-04 1.065256e-03 20 499833 499869 37 - 2.464 2.299 -0.552
ENSG00000101266 E062 274.2853857 0.0051796335 1.669792e-04 8.221535e-04 20 499870 499923 54 - 2.508 2.350 -0.526
ENSG00000101266 E063 189.9188756 0.0072871920 8.327378e-02 1.646909e-01 20 499924 499934 11 - 2.322 2.232 -0.301
ENSG00000101266 E064 0.1451727 0.0433644862 6.697183e-01   20 499935 500030 96 - 0.106 0.000 -12.240
ENSG00000101266 E065 1.8769246 0.0386883011 2.485800e-01 3.842517e-01 20 500031 500115 85 - 0.543 0.332 -1.121
ENSG00000101266 E066 0.6319842 0.0197994132 4.831271e-01 6.211915e-01 20 500116 500171 56 - 0.263 0.141 -1.123
ENSG00000101266 E067 1.5638658 0.0221624800 2.887782e-02 6.975680e-02 20 500172 500760 589 - 0.544 0.141 -2.706
ENSG00000101266 E068 4.3168965 0.0037976109 6.513213e-03 1.995563e-02 20 500761 503064 2304 - 0.868 0.464 -1.739
ENSG00000101266 E069 0.7469680 0.0183658107 3.979542e-02 9.064606e-02 20 503065 503281 217 - 0.378 0.000 -14.563
ENSG00000101266 E070 1.4272259 0.5647536157 3.567816e-01 5.011656e-01 20 503307 503695 389 - 0.511 0.145 -2.503
ENSG00000101266 E071 3.1022588 0.0049599746 3.715045e-02 8.576492e-02 20 504166 505117 952 - 0.735 0.403 -1.537
ENSG00000101266 E072 289.6460709 0.0080695575 5.757785e-02 1.224636e-01 20 505118 505229 112 - 2.507 2.408 -0.331
ENSG00000101266 E073 0.6287620 0.0181252846 7.629964e-01 8.464746e-01 20 505230 505250 21 - 0.192 0.246 0.461
ENSG00000101266 E074 2.9663459 0.0421705672 7.637685e-01 8.470234e-01 20 505911 508450 2540 - 0.577 0.644 0.295
ENSG00000101266 E075 350.1393250 0.0093085753 4.180126e-03 1.364990e-02 20 508451 508605 155 - 2.612 2.453 -0.529
ENSG00000101266 E076 170.8642574 0.0131197317 6.050085e-04 2.551752e-03 20 508606 508621 16 - 2.327 2.097 -0.772
ENSG00000101266 E077 227.8484659 0.0110018841 1.414783e-03 5.355921e-03 20 508622 508660 39 - 2.439 2.244 -0.651
ENSG00000101266 E078 2.9326813 0.0540404022 2.975180e-01 4.388686e-01 20 510168 510338 171 - 0.507 0.682 0.784
ENSG00000101266 E079 0.2966881 0.0270047035 3.094272e-01   20 526696 526942 247 - 0.192 0.000 -13.241
ENSG00000101266 E080 40.6420696 0.0010919710 4.366962e-01 5.787353e-01 20 527933 528049 117 - 1.638 1.597 -0.137
ENSG00000101266 E081 0.2924217 0.0290785164 3.099107e-01   20 539199 539674 476 - 0.192 0.000 -13.240
ENSG00000101266 E082 0.1451727 0.0433644862 6.697183e-01   20 539675 539824 150 - 0.106 0.000 -12.240
ENSG00000101266 E083 0.0000000       20 539825 540009 185 -      
ENSG00000101266 E084 0.0000000       20 540828 540889 62 -      
ENSG00000101266 E085 0.0000000       20 540890 541099 210 -      
ENSG00000101266 E086 0.5514428 0.0203669215 4.592169e-02 1.018948e-01 20 543054 543387 334 - 0.000 0.332 14.476
ENSG00000101266 E087 1.4520025 0.0742480241 6.401416e-01 7.534350e-01 20 543388 543631 244 - 0.426 0.332 -0.538
ENSG00000101266 E088 0.1817044 0.0414784943 3.570285e-01   20 543632 543671 40 - 0.000 0.141 12.891
ENSG00000101266 E089 216.7410643 0.0117665455 9.730585e-03 2.809936e-02 20 543672 543835 164 - 2.407 2.241 -0.554