• ENSG00000088881
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000088881

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000380648 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding protein_coding 4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 0.3083813 0.6117277 0.3524207 0.61172773 0.29639078 -0.7786176 0.05103750 0.0740000 0.07180000 -0.00220000 0.7307090281 0.0002000902 FALSE TRUE
ENST00000449079 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding nonsense_mediated_decay 4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 0.5207506 1.3187535 0.1239908 0.82289405 0.12399076 -3.3098681 0.09496250 0.1785333 0.03026667 -0.14826667 0.5542506774 0.0002000902 TRUE TRUE
ENST00000477287 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding processed_transcript 4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 1.6931990 2.7537993 1.2718830 0.07517362 0.04456931 -1.1083882 0.33294583 0.3521333 0.28330000 -0.06883333 0.3248151791 0.0002000902   FALSE
ENST00000609451 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding protein_coding 4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 1.3270721 1.9294456 1.3681905 0.97453265 0.14389859 -0.4928691 0.28103333 0.2348333 0.30866667 0.07383333 0.8312025576 0.0002000902 FALSE TRUE
MSTRG.20261.3 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding   4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 0.2820348 0.1243757 0.7044640 0.06650888 0.08921120 2.4105888 0.07295417 0.0160000 0.15910000 0.14310000 0.0002000902 0.0002000902 FALSE FALSE
MSTRG.20261.6 ENSG00000088881 HEK293_OSMI2_2hA HEK293_TMG_2hB EBF4 protein_coding   4.960442 7.851762 4.510368 0.370311 0.2516271 -0.7984127 0.7230563 0.9372794 0.3709738 0.30996302 0.19612736 -1.3140983 0.14337917 0.1232000 0.08273333 -0.04046667 0.7596728717 0.0002000902 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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TableFilter v0.7.3

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©2015-2025 Max Guglielmi
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Page of 3
groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000088881 E001 0.7750806 0.0162238901 2.492844e-02 6.172550e-02 20 2692874 2692877 4 + 0.469 0.086 -3.159
ENSG00000088881 E002 0.7750806 0.0162238901 2.492844e-02 6.172550e-02 20 2692878 2692878 1 + 0.469 0.086 -3.160
ENSG00000088881 E003 1.5229910 0.1496720483 1.212222e-01 2.216723e-01 20 2692879 2692950 72 + 0.594 0.268 -1.778
ENSG00000088881 E004 4.6001770 0.1139194784 4.191330e-01 5.623803e-01 20 2692951 2693148 198 + 0.837 0.649 -0.764
ENSG00000088881 E005 1.3297456 0.0604720189 8.855749e-02 1.729208e-01 20 2693574 2693660 87 + 0.536 0.219 -1.889
ENSG00000088881 E006 17.1715132 0.0013347963 7.768314e-01 8.563022e-01 20 2693661 2693782 122 + 1.232 1.210 -0.076
ENSG00000088881 E007 27.8153815 0.0007356328 1.512490e-01 2.633731e-01 20 2705577 2705667 91 + 1.480 1.385 -0.326
ENSG00000088881 E008 31.1802263 0.0006964889 4.174278e-01 5.607742e-01 20 2705668 2705733 66 + 1.494 1.444 -0.171
ENSG00000088881 E009 37.6478221 0.0007778340 9.257616e-02 1.791466e-01 20 2705974 2706037 64 + 1.601 1.504 -0.331
ENSG00000088881 E010 37.2518539 0.0008403213 1.505740e-01 2.624641e-01 20 2706209 2706264 56 + 1.585 1.501 -0.286
ENSG00000088881 E011 42.7195988 0.0005471114 8.798739e-01 9.269435e-01 20 2707947 2708020 74 + 1.590 1.585 -0.018
ENSG00000088881 E012 35.8531580 0.0006015670 8.331147e-01 8.954447e-01 20 2709574 2709642 69 + 1.520 1.510 -0.034
ENSG00000088881 E013 33.0869891 0.0006448542 1.004418e-01 1.911384e-01 20 2748549 2748630 82 + 1.551 1.451 -0.343
ENSG00000088881 E014 2.9581434 0.0054465072 1.489273e-04 7.423909e-04 20 2749187 2749400 214 + 0.893 0.320 -2.645
ENSG00000088881 E015 30.3860190 0.0008241731 7.173731e-01 8.127758e-01 20 2749401 2749518 118 + 1.458 1.437 -0.073
ENSG00000088881 E016 38.1844333 0.0005546315 7.028183e-01 8.016016e-01 20 2749620 2749753 134 + 1.520 1.546 0.091
ENSG00000088881 E017 36.3196406 0.0006336157 2.133652e-01 3.425041e-01 20 2749847 2749973 127 + 1.458 1.541 0.284
ENSG00000088881 E018 32.5927724 0.0006303229 6.105596e-01 7.298814e-01 20 2751700 2751788 89 + 1.494 1.464 -0.102
ENSG00000088881 E019 20.3197464 0.0013233100 3.601298e-01 5.044461e-01 20 2751922 2751987 66 + 1.321 1.250 -0.249
ENSG00000088881 E020 18.7385530 0.0112406953 7.242410e-01 8.178324e-01 20 2752086 2752263 178 + 1.256 1.227 -0.103
ENSG00000088881 E021 7.9964123 0.0053130399 1.169279e-03 4.536853e-03 20 2752357 2752495 139 + 1.135 0.763 -1.398
ENSG00000088881 E022 9.5215497 0.0643733416 7.434502e-02 1.504941e-01 20 2752496 2752545 50 + 1.135 0.877 -0.954
ENSG00000088881 E023 27.0315602 0.0007705393 1.482106e-03 5.579345e-03 20 2755088 2755626 539 + 1.539 1.327 -0.729
ENSG00000088881 E024 10.5483001 0.0303930094 3.225233e-01 4.658226e-01 20 2755627 2755649 23 + 1.086 0.965 -0.445
ENSG00000088881 E025 19.2903749 0.0136013872 8.965474e-01 9.378578e-01 20 2755650 2755742 93 + 1.256 1.248 -0.029
ENSG00000088881 E026 27.1393903 0.0007785284 4.020775e-02 9.141909e-02 20 2755743 2755824 82 + 1.279 1.437 0.550
ENSG00000088881 E027 34.7976950 0.0028672324 1.218622e-02 3.397661e-02 20 2758909 2758984 76 + 1.369 1.551 0.626
ENSG00000088881 E028 138.1109122 0.0025617343 1.067007e-05 7.045948e-05 20 2759268 2759882 615 + 1.959 2.133 0.582
ENSG00000088881 E029 33.1976723 0.0048120409 3.519356e-05 2.056354e-04 20 2759883 2760108 226 + 1.219 1.556 1.167