• ENSG00000086475
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000086475

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000327347 ENSG00000086475 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPHS1 protein_coding protein_coding 51.49169 52.42121 56.07939 6.324438 0.4819032 0.09730205 10.39247 12.484884 12.66433 3.8818749 0.4741357 0.02057157 0.1940292 0.2322333 0.2258333 -0.0064000 1.000000e+00 3.596563e-08 FALSE TRUE
MSTRG.3559.3 ENSG00000086475 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPHS1 protein_coding   51.49169 52.42121 56.07939 6.324438 0.4819032 0.09730205 11.67550 6.541122 15.72344 0.7060779 0.4547737 1.26402019 0.2237125 0.1263000 0.2805333 0.1542333 3.596563e-08 3.596563e-08 FALSE TRUE
MSTRG.3559.7 ENSG00000086475 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPHS1 protein_coding   51.49169 52.42121 56.07939 6.324438 0.4819032 0.09730205 23.49058 28.106971 20.60071 3.1588471 0.8393425 -0.44804683 0.4670583 0.5400000 0.3674333 -0.1725667 1.352131e-02 3.596563e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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TableFilter v0.7.3

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000086475 E001 2.574493 0.0310554539 3.928655e-02 8.969509e-02 10 13317428 13317438 11 - 0.314 0.663 1.767
ENSG00000086475 E002 244.660532 0.0151218159 3.862836e-01 5.304801e-01 10 13317439 13318079 641 - 2.357 2.406 0.166
ENSG00000086475 E003 241.833147 0.0127578094 9.603448e-02 1.844167e-01 10 13318080 13318563 484 - 2.442 2.333 -0.364
ENSG00000086475 E004 140.821275 0.0161421206 3.197791e-05 1.889678e-04 10 13318564 13318669 106 - 2.296 2.004 -0.977
ENSG00000086475 E005 327.559958 0.0141314033 9.419918e-08 9.611026e-07 10 13318670 13319034 365 - 2.675 2.344 -1.101
ENSG00000086475 E006 684.698041 0.0007188196 7.755408e-01 8.553972e-01 10 13319035 13319356 322 - 2.845 2.829 -0.053
ENSG00000086475 E007 725.680352 0.0001306562 1.182122e-08 1.437970e-07 10 13322835 13323041 207 - 2.828 2.886 0.192
ENSG00000086475 E008 251.550256 0.0014046799 8.128010e-02 1.615531e-01 10 13323042 13323047 6 - 2.386 2.412 0.088
ENSG00000086475 E009 534.784610 0.0001511192 9.826726e-05 5.138830e-04 10 13328351 13328450 100 - 2.705 2.747 0.141
ENSG00000086475 E010 476.104669 0.0006055567 1.140746e-03 4.440148e-03 10 13329698 13329788 91 - 2.654 2.696 0.141
ENSG00000086475 E011 380.269150 0.0012136855 5.025740e-03 1.600268e-02 10 13333817 13333876 60 - 2.554 2.599 0.151
ENSG00000086475 E012 349.195572 0.0002088480 2.562784e-03 8.950682e-03 10 13333877 13333900 24 - 2.521 2.562 0.135
ENSG00000086475 E013 507.558321 0.0001135304 5.989901e-02 1.264352e-01 10 13333901 13333971 71 - 2.701 2.712 0.037
ENSG00000086475 E014 581.461252 0.0006582021 6.010336e-01 7.221986e-01 10 13336243 13336350 108 - 2.772 2.757 -0.048
ENSG00000086475 E015 347.238046 0.0017600530 8.963825e-01 9.377599e-01 10 13338705 13338715 11 - 2.552 2.528 -0.080
ENSG00000086475 E016 560.076387 0.0014397984 9.933118e-01 9.999731e-01 10 13338716 13338808 93 - 2.762 2.734 -0.092
ENSG00000086475 E017 15.374713 0.0014835424 5.028279e-01 6.388316e-01 10 13340691 13340908 218 - 1.254 1.179 -0.264
ENSG00000086475 E018 636.113399 0.0015233264 1.207047e-01 2.209706e-01 10 13344758 13345028 271 - 2.837 2.773 -0.213
ENSG00000086475 E019 18.149892 0.0088104524 5.203638e-02 1.127791e-01 10 13345029 13345460 432 - 1.379 1.180 -0.698
ENSG00000086475 E020 21.705323 0.0023824148 4.615144e-08 5.012757e-07 10 13347277 13347629 353 - 1.555 1.114 -1.540
ENSG00000086475 E021 100.090426 0.0091432702 1.692107e-04 8.317789e-04 10 13348000 13348298 299 - 2.131 1.878 -0.850