ENSG00000079102

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000265814 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.142778881 0.15834504 0.00000000 0.079195943 0.00000000 -4.0733493 0.275958333 0.47820000 0.00000000 -0.47820000 0.10645165 0.01655783 FALSE TRUE
ENST00000360348 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.073445588 0.00000000 0.05290979 0.000000000 0.05290979 2.6532845 0.068291667 0.00000000 0.03080000 0.03080000 1.00000000 0.01655783 FALSE TRUE
ENST00000422361 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.020318184 0.00000000 0.07760208 0.000000000 0.07760208 3.1309651 0.030941667 0.00000000 0.09996667 0.09996667 1.00000000 0.01655783 FALSE TRUE
ENST00000436581 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.003486601 0.02789281 0.00000000 0.027892812 0.00000000 -1.9219242 0.013037500 0.10430000 0.00000000 -0.10430000 0.45830878 0.01655783 FALSE TRUE
ENST00000518832 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.125582247 0.02970842 0.31934865 0.029708420 0.09344725 3.0520988 0.126587500 0.06913333 0.24863333 0.17950000 0.29550479 0.01655783   FALSE
ENST00000520978 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding nonsense_mediated_decay 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.011322693 0.00000000 0.09058154 0.000000000 0.09058154 3.3302936 0.006591667 0.00000000 0.05273333 0.05273333 1.00000000 0.01655783 FALSE FALSE
ENST00000523290 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding retained_intron 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.004690027 0.01702211 0.00000000 0.008873744 0.00000000 -1.4341402 0.012466667 0.05323333 0.00000000 -0.05323333 0.16232153 0.01655783 FALSE TRUE
ENST00000523629 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.109116052 0.00000000 0.32530199 0.000000000 0.03645706 5.0673891 0.180500000 0.00000000 0.29913333 0.29913333 0.01655783 0.01655783 FALSE TRUE
ENST00000615601 ENSG00000079102 HEK293_OSMI2_2hA HEK293_TMG_2hB RUNX1T1 protein_coding protein_coding 0.7262696 0.3226052 1.249676 0.05353654 0.2717713 1.921171 0.135409090 0.04772066 0.04372368 0.047720657 0.04372368 -0.1035296 0.175941667 0.17843333 0.02546667 -0.15296667 0.77699143 0.01655783 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000079102 E001 0.0000000       8 91954967 91954974 8 -      
ENSG00000079102 E002 36.7571415 0.040769389 2.088888e-06 1.618535e-05 8 91954975 91958923 3949 - 1.345 1.809 1.584
ENSG00000079102 E003 5.6163645 0.003061232 7.316801e-01 8.232981e-01 8 91958924 91959786 863 - 0.785 0.782 -0.009
ENSG00000079102 E004 1.0663564 0.012043898 9.499139e-01 9.726689e-01 8 91959787 91959792 6 - 0.288 0.327 0.253
ENSG00000079102 E005 4.3975637 0.029345585 2.348208e-01 3.681465e-01 8 91959793 91960130 338 - 0.742 0.580 -0.691
ENSG00000079102 E006 2.9507565 0.005365266 5.179650e-01 6.522705e-01 8 91960131 91960239 109 - 0.583 0.512 -0.331
ENSG00000079102 E007 2.4723640 0.005972489 4.158857e-01 5.592304e-01 8 91960240 91960241 2 - 0.538 0.429 -0.540
ENSG00000079102 E008 4.4621960 0.003900341 1.936271e-01 3.183484e-01 8 91960242 91960440 199 - 0.742 0.581 -0.687
ENSG00000079102 E009 2.6184802 0.007883925 7.115568e-01 8.084968e-01 8 91960441 91960517 77 - 0.538 0.511 -0.125
ENSG00000079102 E010 4.1234738 0.090717792 8.003742e-01 8.727583e-01 8 91970658 91970770 113 - 0.643 0.742 0.415
ENSG00000079102 E011 2.9140079 0.099880316 6.044881e-01 7.250284e-01 8 91970771 91970848 78 - 0.514 0.644 0.590
ENSG00000079102 E012 0.0000000       8 91970849 91971160 312 -      
ENSG00000079102 E013 3.2377765 0.005214525 2.301108e-01 3.625988e-01 8 91975905 91975973 69 - 0.513 0.740 0.991
ENSG00000079102 E014 0.1472490 0.042438096 1.000000e+00   8 91979777 91979931 155 - 0.075 0.000 -11.396
ENSG00000079102 E015 4.4578278 0.003934854 6.804691e-01 7.843417e-01 8 91986124 91986325 202 - 0.712 0.693 -0.077
ENSG00000079102 E016 2.9883218 0.005466539 1.845607e-01 3.069321e-01 8 91986887 91986916 30 - 0.624 0.429 -0.928
ENSG00000079102 E017 3.2537768 0.004853874 4.875733e-03 1.558344e-02 8 91986917 91986972 56 - 0.695 0.194 -2.817
ENSG00000079102 E018 2.2291489 0.007275140 4.053668e-02 9.200265e-02 8 91991639 91991670 32 - 0.561 0.194 -2.233
ENSG00000079102 E019 2.4087770 0.006541817 1.477003e-01 2.585654e-01 8 91991671 91991728 58 - 0.561 0.327 -1.232
ENSG00000079102 E020 3.3602383 0.004573133 1.183628e-01 2.175876e-01 8 91991729 91991889 161 - 0.661 0.429 -1.087
ENSG00000079102 E021 0.1451727 0.042374522 1.000000e+00   8 91994487 91994623 137 - 0.075 0.000 -11.396
ENSG00000079102 E022 0.1451727 0.042374522 1.000000e+00   8 92003302 92003380 79 - 0.075 0.000 -11.396
ENSG00000079102 E023 0.4407149 0.023204059 8.160862e-01 8.836222e-01 8 92004422 92005115 694 - 0.139 0.193 0.574
ENSG00000079102 E024 0.7427016 0.015675537 1.487974e-01 2.600461e-01 8 92005116 92005160 45 - 0.288 0.000 -13.625
ENSG00000079102 E025 0.7363589 0.015632365 1.489024e-01 2.601885e-01 8 92005161 92005165 5 - 0.288 0.000 -13.625
ENSG00000079102 E026 1.0319011 0.012758221 4.083723e-01 5.519638e-01 8 92005166 92005167 2 - 0.329 0.194 -1.010
ENSG00000079102 E027 1.1791501 0.012537048 3.094973e-01 4.518007e-01 8 92005168 92005174 7 - 0.365 0.194 -1.233
ENSG00000079102 E028 1.9218517 0.008371899 7.338166e-02 1.489307e-01 8 92005175 92005230 56 - 0.513 0.194 -2.010
ENSG00000079102 E029 2.2948123 0.007010200 1.883433e-01 3.116449e-01 8 92005231 92005297 67 - 0.538 0.327 -1.125
ENSG00000079102 E030 0.1482932 0.042533364 1.801379e-01   8 92005298 92006768 1471 - 0.000 0.193 14.115
ENSG00000079102 E031 0.4031496 0.024441170 4.385950e-02 9.812583e-02 8 92009646 92011001 1356 - 0.000 0.328 15.100
ENSG00000079102 E032 2.0045807 0.007687263 3.013242e-01 4.431168e-01 8 92011002 92011052 51 - 0.488 0.327 -0.884
ENSG00000079102 E033 1.2630250 0.138992566 3.710415e-01 5.154520e-01 8 92011053 92011087 35 - 0.366 0.195 -1.220
ENSG00000079102 E034 1.1178523 0.162977711 4.775968e-01 6.161257e-01 8 92011088 92011091 4 - 0.329 0.195 -0.997
ENSG00000079102 E035 1.8240327 0.261704895 9.239470e-01 9.561063e-01 8 92014579 92014640 62 - 0.401 0.438 0.201
ENSG00000079102 E036 1.2243138 0.087072681 4.233855e-01 5.664446e-01 8 92014641 92014660 20 - 0.244 0.433 1.177
ENSG00000079102 E037 0.8974367 0.617831941 6.416717e-01 7.546499e-01 8 92014661 92014669 9 - 0.196 0.342 1.073
ENSG00000079102 E038 1.7445234 0.097014417 4.615021e-01 6.014445e-01 8 92014670 92014685 16 - 0.329 0.518 1.017
ENSG00000079102 E039 1.7445234 0.097014417 4.615021e-01 6.014445e-01 8 92014686 92014687 2 - 0.329 0.518 1.017
ENSG00000079102 E040 2.5571548 0.008185993 6.270121e-01 7.428900e-01 8 92014688 92014724 37 - 0.460 0.582 0.579
ENSG00000079102 E041 1.8854297 0.008743460 5.280676e-01 6.609681e-01 8 92014725 92014727 3 - 0.365 0.512 0.771
ENSG00000079102 E042 2.2583903 0.038394801 4.332984e-01 5.757022e-01 8 92014728 92014746 19 - 0.399 0.584 0.913
ENSG00000079102 E043 1.7037253 0.014502688 8.676885e-01 9.188934e-01 8 92014747 92014756 10 - 0.365 0.430 0.357
ENSG00000079102 E044 1.4070372 0.012188393 5.463831e-01 6.765755e-01 8 92014757 92014765 9 - 0.288 0.430 0.842
ENSG00000079102 E045 1.8790870 0.008705923 5.277955e-01 6.607803e-01 8 92014766 92014787 22 - 0.365 0.512 0.771
ENSG00000079102 E046 1.5103927 0.010092973 7.050449e-01 8.034784e-01 8 92014788 92014791 4 - 0.329 0.429 0.578
ENSG00000079102 E047 1.8833534 0.010752257 5.296362e-01 6.623844e-01 8 92014792 92014797 6 - 0.365 0.512 0.772
ENSG00000079102 E048 1.7381807 0.011712460 4.019815e-01 5.456891e-01 8 92014798 92014820 23 - 0.329 0.512 0.994
ENSG00000079102 E049 1.8069671 0.008692788 9.846178e-01 9.944496e-01 8 92017226 92017247 22 - 0.399 0.429 0.162
ENSG00000079102 E050 2.0973125 0.007544941 7.159408e-01 8.117206e-01 8 92017248 92017262 15 - 0.460 0.429 -0.160
ENSG00000079102 E051 1.7704354 0.008835193 4.715105e-01 6.106191e-01 8 92017263 92017265 3 - 0.431 0.327 -0.592
ENSG00000079102 E052 2.3918106 0.007488701 5.029931e-01 6.389805e-01 8 92017266 92017289 24 - 0.513 0.429 -0.423
ENSG00000079102 E053 1.7264282 0.009961211 4.733910e-01 6.123219e-01 8 92017290 92017292 3 - 0.431 0.327 -0.593
ENSG00000079102 E054 1.8736772 0.010620048 3.809790e-01 5.252592e-01 8 92017293 92017303 11 - 0.460 0.327 -0.745
ENSG00000079102 E055 1.6522320 0.012101208 1.328456e-01 2.380665e-01 8 92017304 92017306 3 - 0.460 0.194 -1.746
ENSG00000079102 E056 2.0961692 0.009169739 5.519953e-02 1.183323e-01 8 92017307 92017345 39 - 0.538 0.194 -2.125
ENSG00000079102 E057 1.7994810 0.013815818 1.009133e-01 1.918583e-01 8 92017346 92017363 18 - 0.488 0.194 -1.883
ENSG00000079102 E058 0.1451727 0.042374522 1.000000e+00   8 92017364 92017399 36 - 0.075 0.000 -11.396
ENSG00000079102 E059 0.1451727 0.042374522 1.000000e+00   8 92017400 92017431 32 - 0.075 0.000 -11.396
ENSG00000079102 E060 0.0000000       8 92017432 92017637 206 -      
ENSG00000079102 E061 0.0000000       8 92019128 92019175 48 -      
ENSG00000079102 E062 0.1472490 0.042438096 1.000000e+00   8 92062546 92062622 77 - 0.075 0.000 -11.396
ENSG00000079102 E063 0.0000000       8 92062623 92062623 1 -      
ENSG00000079102 E064 0.0000000       8 92062624 92062627 4 -      
ENSG00000079102 E065 0.0000000       8 92062628 92062709 82 -      
ENSG00000079102 E066 0.0000000       8 92062710 92062963 254 -      
ENSG00000079102 E067 0.0000000       8 92063514 92063623 110 -      
ENSG00000079102 E068 0.0000000       8 92071224 92071387 164 -      
ENSG00000079102 E069 2.0618276 0.007524307 5.129163e-03 1.628055e-02 8 92075965 92076132 168 - 0.561 0.000 -15.064
ENSG00000079102 E070 0.7427016 0.015675537 1.487974e-01 2.600461e-01 8 92076133 92076137 5 - 0.288 0.000 -13.625
ENSG00000079102 E071 0.7427016 0.015675537 1.487974e-01 2.600461e-01 8 92081234 92081293 60 - 0.288 0.000 -13.625
ENSG00000079102 E072 0.0000000       8 92095028 92095171 144 -      
ENSG00000079102 E073 0.0000000       8 92095172 92095215 44 -      
ENSG00000079102 E074 0.0000000       8 92095216 92095228 13 -      
ENSG00000079102 E075 0.0000000       8 92095229 92095229 1 -      
ENSG00000079102 E076 0.0000000       8 92095230 92095230 1 -      
ENSG00000079102 E077 0.0000000       8 92095231 92095235 5 -      
ENSG00000079102 E078 0.0000000       8 92095236 92095236 1 -      
ENSG00000079102 E079 0.0000000       8 92095237 92095257 21 -      
ENSG00000079102 E080 0.0000000       8 92095258 92095261 4 -      
ENSG00000079102 E081 0.0000000       8 92095262 92095262 1 -      
ENSG00000079102 E082 0.2934659 0.030319916 4.785468e-01   8 92095347 92095416 70 - 0.075 0.193 1.573
ENSG00000079102 E083 0.1482932 0.042533364 1.801379e-01   8 92095417 92095443 27 - 0.000 0.193 14.115
ENSG00000079102 E084 0.0000000       8 92095444 92095450 7 -      
ENSG00000079102 E085 0.0000000       8 92095451 92095472 22 -      
ENSG00000079102 E086 0.0000000       8 92095473 92095478 6 -      
ENSG00000079102 E087 0.0000000       8 92095479 92095482 4 -      
ENSG00000079102 E088 0.0000000       8 92095483 92095484 2 -      
ENSG00000079102 E089 0.0000000       8 92095485 92095510 26 -      
ENSG00000079102 E090 0.0000000       8 92095511 92095611 101 -      
ENSG00000079102 E091 0.0000000       8 92095612 92095613 2 -      
ENSG00000079102 E092 0.0000000       8 92095614 92095637 24 -      
ENSG00000079102 E093 0.0000000       8 92095638 92095654 17 -      
ENSG00000079102 E094 0.0000000       8 92099580 92099656 77 -      
ENSG00000079102 E095 0.0000000       8 92099657 92099688 32 -      
ENSG00000079102 E096 2.2006575 0.045033084 5.636811e-03 1.764881e-02 8 92102857 92102907 51 - 0.582 0.000 -15.142
ENSG00000079102 E097 1.7641073 0.011341814 9.947369e-02 1.896782e-01 8 92102908 92102913 6 - 0.488 0.194 -1.885
ENSG00000079102 E098 2.9788586 0.006484870 5.448984e-02 1.171065e-01 8 92102914 92103226 313 - 0.643 0.327 -1.595
ENSG00000079102 E099 0.6256415 0.017724767 9.281948e-01 9.587937e-01 8 92103227 92103228 2 - 0.195 0.194 -0.009
ENSG00000079102 E100 0.6256415 0.017724767 9.281948e-01 9.587937e-01 8 92103229 92103286 58 - 0.195 0.194 -0.009