• ENSG00000078177
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000078177

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000261435 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding protein_coding 2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.5178724 0.19061734 1.10389910 0.02260664 0.24206480 2.4731003 0.41531250 0.8520333 0.27523333 -0.57680000 0.001767821 0.001767821 FALSE TRUE
ENST00000511480 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding nonsense_mediated_decay 2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.4687268 0.00000000 0.79514368 0.00000000 0.28299317 6.3311744 0.22729583 0.0000000 0.18613333 0.18613333 0.148703391 0.001767821 FALSE TRUE
ENST00000513269 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding protein_coding 2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.3712928 0.00000000 0.58044267 0.00000000 0.01846226 5.8837251 0.12070000 0.0000000 0.14060000 0.14060000 0.113407985 0.001767821 FALSE TRUE
MSTRG.24769.1 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding   2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.5853894 0.00000000 1.22274192 0.00000000 0.30610026 6.9457270 0.14803750 0.0000000 0.28953333 0.28953333 0.023256287 0.001767821 FALSE TRUE
MSTRG.24769.3 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding   2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.0423775 0.03609239 0.07987075 0.01386382 0.07987075 0.9633229 0.04217917 0.1479667 0.01816667 -0.12980000 0.337304948 0.001767821 TRUE TRUE
MSTRG.24769.6 ENSG00000078177 HEK293_OSMI2_2hA HEK293_TMG_2hB N4BP2 protein_coding   2.149385 0.2267097 4.142344 0.03646998 0.2318903 4.132735 0.1021514 0.00000000 0.28384006 0.00000000 0.08836151 4.8769592 0.02732917 0.0000000 0.07146667 0.07146667 0.544420392 0.001767821 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000078177 E001 1.1824861 0.0113092369 1.000000e+00 1.000000e+00 4 40056850 40056912 63 + 0.198 0.000 -9.820
ENSG00000078177 E002 1.5554467 0.0095256690 6.247993e-01 7.410542e-01 4 40056913 40056928 16 + 0.217 0.393 1.180
ENSG00000078177 E003 1.4102740 0.0098953082 5.560387e-01 6.847811e-01 4 40056929 40056935 7 + 0.198 0.393 1.350
ENSG00000078177 E004 5.7000926 0.0053415883 3.191205e-01 4.621555e-01 4 40056936 40057030 95 + 0.564 0.393 -0.860
ENSG00000078177 E005 9.1668981 0.0019600542 9.592486e-03 2.776311e-02 4 40073455 40073551 97 + 0.738 0.000 -12.816
ENSG00000078177 E006 22.0797944 0.0009034763 5.134112e-02 1.115364e-01 4 40097227 40097569 343 + 1.056 0.837 -0.821
ENSG00000078177 E007 2.6827648 0.0298602251 2.990334e-01 4.405196e-01 4 40100036 40100126 91 + 0.362 0.000 -11.503
ENSG00000078177 E008 20.1115350 0.0009393381 7.253183e-03 2.188361e-02 4 40102075 40102374 300 + 1.025 0.595 -1.706
ENSG00000078177 E009 22.4879329 0.0008672240 1.379562e-02 3.776190e-02 4 40102375 40102812 438 + 1.067 0.733 -1.275
ENSG00000078177 E010 10.5040056 0.0017391263 2.069665e-01 3.349008e-01 4 40102813 40102906 94 + 0.771 0.595 -0.738
ENSG00000078177 E011 19.7351101 0.0009525815 3.484967e-02 8.136157e-02 4 40102907 40103218 312 + 1.013 0.733 -1.077
ENSG00000078177 E012 11.1925458 0.0097431429 1.748473e-01 2.944931e-01 4 40106900 40107024 125 + 0.797 0.596 -0.839
ENSG00000078177 E013 11.0047768 0.0015732904 4.052366e-02 9.198302e-02 4 40112084 40112172 89 + 0.797 0.393 -1.841
ENSG00000078177 E014 13.6232996 0.0488237669 1.284394e-01 2.319852e-01 4 40113432 40113508 77 + 0.872 0.596 -1.131
ENSG00000078177 E015 9.9054116 0.0635363408 3.459812e-01 4.901227e-01 4 40117869 40117884 16 + 0.751 0.596 -0.655
ENSG00000078177 E016 13.0163050 0.0348184559 6.426144e-01 7.553785e-01 4 40117885 40118024 140 + 0.841 0.840 -0.005
ENSG00000078177 E017 108.2509673 0.0051633757 6.792692e-07 5.848544e-06 4 40119932 40122087 2156 + 1.717 1.391 -1.117
ENSG00000078177 E018 18.5422544 0.0009800497 3.038872e-01 4.458649e-01 4 40122088 40122309 222 + 0.981 0.921 -0.224
ENSG00000078177 E019 13.9265022 0.0017169869 7.697235e-01 8.512956e-01 4 40123127 40123212 86 + 0.866 0.921 0.212
ENSG00000078177 E020 11.8381459 0.0015142898 6.937490e-01 7.947408e-01 4 40124160 40124205 46 + 0.807 0.837 0.120
ENSG00000078177 E021 22.5981803 0.0008947781 4.306253e-01 5.732280e-01 4 40126134 40126330 197 + 1.056 1.053 -0.013
ENSG00000078177 E022 17.5495130 0.0010684478 6.519879e-01 7.627482e-01 4 40131801 40131919 119 + 0.954 0.992 0.140
ENSG00000078177 E023 21.6780262 0.0009292635 5.183504e-01 6.525913e-01 4 40136944 40137082 139 + 1.036 1.053 0.059
ENSG00000078177 E024 14.3849110 0.0040377840 1.848542e-01 3.073015e-01 4 40142673 40142723 51 + 0.887 0.733 -0.604
ENSG00000078177 E025 21.4751061 0.0009108650 1.948139e-02 5.037537e-02 4 40142724 40142861 138 + 1.048 0.733 -1.205
ENSG00000078177 E026 19.3034665 0.0009890899 4.018047e-02 9.137165e-02 4 40144632 40144800 169 + 1.004 0.733 -1.043
ENSG00000078177 E027 16.0284809 0.0019196901 8.292091e-01 8.927411e-01 4 40152780 40152903 124 + 0.910 1.053 0.528
ENSG00000078177 E028 9.4551871 0.0019104601 4.800882e-02 1.056504e-01 4 40154192 40154267 76 + 0.690 1.106 1.595
ENSG00000078177 E029 123.4748997 0.0190219872 2.340617e-08 2.692143e-07 4 40154268 40157861 3594 + 1.716 2.192 1.601
ENSG00000078177 E030 14.9757960 0.0631907521 1.266120e-10 2.197550e-09 4 40157862 40158252 391 + 0.702 1.757 3.796
ENSG00000078177 E031 0.2903454 0.3299594947 6.672768e-01   4 40185099 40185238 140 + 0.058 0.000 -8.721