ENSG00000077782

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000326324 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 3.477580 0.5261890 7.725436 0.5261890 0.1898228 3.8506691 0.09483333 0.01253333 0.2377333 0.2252000000 1.498453e-02 1.06074e-19 FALSE TRUE
ENST00000356207 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 5.395076 5.5188781 4.748141 1.7865327 0.5965166 -0.2165886 0.14191667 0.14006667 0.1449667 0.0049000000 9.222683e-01 1.06074e-19 FALSE TRUE
ENST00000397103 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 7.570440 8.9254678 4.347004 0.6068062 0.1656385 -1.0362067 0.19904583 0.23116667 0.1344333 -0.0967333333 5.766589e-03 1.06074e-19 FALSE TRUE
ENST00000397113 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 3.086769 4.2458869 0.000000 0.6765722 0.0000000 -8.7333160 0.07812500 0.11110000 0.0000000 -0.1111000000 1.060740e-19 1.06074e-19 FALSE TRUE
ENST00000425967 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 4.982250 6.2027146 5.199265 0.2310383 0.2536345 -0.2541439 0.13272917 0.16050000 0.1597333 -0.0007666667 1.000000e+00 1.06074e-19 FALSE TRUE
ENST00000447712 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding protein_coding 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 4.556620 6.3275551 3.914718 0.8776736 0.2847765 -0.6913374 0.11985417 0.16383333 0.1209333 -0.0429000000 4.690020e-01 1.06074e-19 FALSE TRUE
ENST00000475621 ENSG00000077782 HEK293_OSMI2_2hA HEK293_TMG_2hB FGFR1 protein_coding retained_intron 37.87644 38.80847 32.53489 1.976699 1.273093 -0.2543123 2.367674 0.7583546 1.263118 0.3594056 0.7138073 0.7285221 0.06145833 0.01906667 0.0374000 0.0183333333 7.572264e-01 1.06074e-19 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000077782 E001 0.1451727 0.0434739626 3.531634e-01   8 38392568 38392971 404 - 0.141 0.000 -9.606
ENSG00000077782 E002 4.3878043 0.0037732859 4.892209e-01 6.266879e-01 8 38400215 38400535 321 - 0.777 0.687 -0.369
ENSG00000077782 E003 4.3176579 0.0389379099 7.379584e-01 8.279677e-01 8 38400536 38400788 253 - 0.685 0.751 0.272
ENSG00000077782 E004 1.7798220 0.0244427540 7.446112e-01 8.328769e-01 8 38401560 38401636 77 - 0.404 0.466 0.326
ENSG00000077782 E005 0.9995446 0.0128900178 1.975784e-01 3.231858e-01 8 38401637 38401683 47 - 0.141 0.376 1.845
ENSG00000077782 E006 1.4102740 0.0139566894 3.471247e-03 1.164275e-02 8 38402894 38403010 117 - 0.610 0.106 -3.474
ENSG00000077782 E007 2.1382138 0.0420629762 1.639948e-04 8.092605e-04 8 38403011 38403095 85 - 0.777 0.106 -4.171
ENSG00000077782 E008 2.7991393 0.0055338030 3.385723e-02 7.947157e-02 8 38410894 38410944 51 - 0.749 0.424 -1.476
ENSG00000077782 E009 6.9936772 0.0035040093 8.707012e-05 4.613002e-04 8 38410945 38411137 193 - 1.123 0.662 -1.775
ENSG00000077782 E010 3.4646234 0.0046447181 7.613222e-04 3.119975e-03 8 38411138 38411138 1 - 0.876 0.377 -2.240
ENSG00000077782 E011 4.4139198 0.0040059034 1.635130e-03 6.073572e-03 8 38411139 38411142 4 - 0.938 0.506 -1.797
ENSG00000077782 E012 10.4893247 0.0017948926 3.681039e-02 8.510639e-02 8 38411143 38411230 88 - 1.159 0.955 -0.746
ENSG00000077782 E013 34.7009359 0.0106508485 3.534218e-01 4.976710e-01 8 38411231 38411430 200 - 1.578 1.517 -0.208
ENSG00000077782 E014 55.1101753 0.0004696100 2.113363e-01 3.400701e-01 8 38411431 38411626 196 - 1.690 1.758 0.231
ENSG00000077782 E015 43.2109425 0.0005373536 2.900757e-02 7.002201e-02 8 38411627 38411641 15 - 1.541 1.671 0.441
ENSG00000077782 E016 335.5855124 0.0056176374 4.958108e-07 4.388220e-06 8 38411642 38412084 443 - 2.361 2.583 0.740
ENSG00000077782 E017 212.6873454 0.0064761933 1.199877e-06 9.798826e-06 8 38412085 38412422 338 - 2.151 2.392 0.804
ENSG00000077782 E018 123.2574583 0.0002798134 2.975848e-12 6.758157e-11 8 38412423 38412595 173 - 1.903 2.155 0.844
ENSG00000077782 E019 74.1196859 0.0004451953 5.690229e-14 1.674688e-12 8 38412596 38412727 132 - 1.599 1.958 1.212
ENSG00000077782 E020 30.1432922 0.0021998088 4.915873e-06 3.504544e-05 8 38412728 38412729 2 - 1.224 1.568 1.194
ENSG00000077782 E021 29.4811321 0.0026974117 3.472703e-06 2.564162e-05 8 38412730 38412730 1 - 1.203 1.562 1.244
ENSG00000077782 E022 29.5208729 0.0029875497 3.964654e-06 2.887035e-05 8 38412731 38412731 1 - 1.203 1.562 1.245
ENSG00000077782 E023 88.7369444 0.0010773643 1.030483e-15 3.883467e-14 8 38412732 38412847 116 - 1.669 2.038 1.244
ENSG00000077782 E024 67.3220289 0.0004113456 1.548388e-14 4.966771e-13 8 38412848 38412879 32 - 1.536 1.922 1.307
ENSG00000077782 E025 83.8127145 0.0003308654 1.861815e-11 3.709279e-10 8 38412880 38412923 44 - 1.707 2.000 0.990
ENSG00000077782 E026 66.0363348 0.0003887063 3.496931e-04 1.578920e-03 8 38412924 38412933 10 - 1.697 1.868 0.580
ENSG00000077782 E027 91.3957106 0.0003335204 1.074129e-04 5.562740e-04 8 38412934 38412961 28 - 1.843 2.003 0.537
ENSG00000077782 E028 81.4175986 0.0003365058 1.447649e-02 3.930643e-02 8 38412962 38412967 6 - 1.829 1.936 0.362
ENSG00000077782 E029 599.3971081 0.0027343199 6.963588e-10 1.064520e-08 8 38412968 38413443 476 - 2.635 2.825 0.630
ENSG00000077782 E030 183.3639830 0.0002397341 4.985489e-09 6.508758e-08 8 38413444 38413465 22 - 2.131 2.304 0.578
ENSG00000077782 E031 216.0744130 0.0003754709 5.326988e-11 9.843756e-10 8 38413466 38413521 56 - 2.194 2.379 0.616
ENSG00000077782 E032 413.7603516 0.0014274302 7.057636e-10 1.078091e-08 8 38413522 38413804 283 - 2.490 2.657 0.558
ENSG00000077782 E033 0.4815130 0.0206154382 7.823572e-01 8.602565e-01 8 38413805 38413917 113 - 0.141 0.191 0.523
ENSG00000077782 E034 284.9360825 0.0013809974 1.978177e-02 5.102520e-02 8 38413918 38414023 106 - 2.393 2.467 0.245
ENSG00000077782 E035 1.2564668 0.0117401619 2.382310e-01 3.720838e-01 8 38414024 38414034 11 - 0.465 0.262 -1.213
ENSG00000077782 E036 317.7045590 0.0002034067 5.562319e-01 6.849305e-01 8 38414152 38414289 138 - 2.474 2.494 0.065
ENSG00000077782 E037 1.5102910 0.0092341911 8.579249e-01 9.122985e-01 8 38414290 38414558 269 - 0.404 0.377 -0.153
ENSG00000077782 E038 206.4616028 0.0001974849 1.494583e-01 2.609337e-01 8 38414559 38414612 54 - 2.318 2.288 -0.100
ENSG00000077782 E039 160.3700302 0.0002276195 4.392721e-02 9.825239e-02 8 38414613 38414629 17 - 2.221 2.170 -0.171
ENSG00000077782 E040 0.8178402 0.0657567274 3.402450e-01 4.842054e-01 8 38414630 38414778 149 - 0.141 0.322 1.515
ENSG00000077782 E041 283.6221931 0.0001591325 3.978154e-01 5.415723e-01 8 38414779 38414901 123 - 2.443 2.431 -0.039
ENSG00000077782 E042 276.3669433 0.0001792498 3.393722e-01 4.832792e-01 8 38415870 38415992 123 - 2.407 2.435 0.095
ENSG00000077782 E043 212.5525081 0.0009380269 3.336294e-01 4.773653e-01 8 38415993 38416060 68 - 2.289 2.324 0.118
ENSG00000077782 E044 2.0638101 0.0071791993 5.679238e-01 6.946595e-01 8 38416061 38416413 353 - 0.404 0.506 0.525
ENSG00000077782 E045 0.8469850 0.0136968632 3.141189e-01 4.568049e-01 8 38417250 38417305 56 - 0.141 0.323 1.524
ENSG00000077782 E046 127.5979159 0.0006971931 7.431350e-01 8.318788e-01 8 38417306 38417312 7 - 2.079 2.097 0.062
ENSG00000077782 E047 283.3862795 0.0001992106 7.092233e-02 1.448737e-01 8 38417313 38417406 94 - 2.457 2.424 -0.109
ENSG00000077782 E048 190.0392845 0.0013725911 2.115764e-02 5.393088e-02 8 38417407 38417416 10 - 2.304 2.240 -0.215
ENSG00000077782 E049 1.5070688 0.0094299567 6.219307e-01 7.388128e-01 8 38417417 38417734 318 - 0.333 0.424 0.524
ENSG00000077782 E050 254.5760342 0.0002092827 6.848698e-03 2.083346e-02 8 38417870 38417917 48 - 2.424 2.368 -0.185
ENSG00000077782 E051 261.8538640 0.0001792145 2.582741e-06 1.961800e-05 8 38417918 38417991 74 - 2.461 2.362 -0.330
ENSG00000077782 E052 325.7434883 0.0001668123 2.341931e-06 1.794861e-05 8 38418228 38418373 146 - 2.551 2.462 -0.296
ENSG00000077782 E053 12.6481296 0.0275018012 1.225401e-02 3.414351e-02 8 38418374 38419532 1159 - 1.280 0.982 -1.072
ENSG00000077782 E054 111.4232009 0.0002823463 2.449471e-02 6.083950e-02 8 38419533 38419538 6 - 2.078 2.008 -0.235
ENSG00000077782 E055 366.4138670 0.0001442108 1.971919e-02 5.089471e-02 8 38419539 38419735 197 - 2.572 2.534 -0.126
ENSG00000077782 E056 17.1587242 0.0010509651 8.441987e-02 1.664750e-01 8 38419736 38420256 521 - 1.321 1.186 -0.475
ENSG00000077782 E057 6.7667353 0.0387682392 6.092532e-01 7.287842e-01 8 38420257 38420350 94 - 0.829 0.911 0.313
ENSG00000077782 E058 9.1638019 0.0018845262 7.651882e-02 1.539241e-01 8 38420351 38420550 200 - 0.854 1.060 0.772
ENSG00000077782 E059 4.0932691 0.0038399530 6.678414e-02 1.380390e-01 8 38421708 38421796 89 - 0.830 0.575 -1.060
ENSG00000077782 E060 202.2226042 0.0050527218 8.742602e-01 9.231497e-01 8 38421797 38421842 46 - 2.282 2.297 0.051
ENSG00000077782 E061 254.6670538 0.0019244766 4.501184e-01 5.912866e-01 8 38421843 38421941 99 - 2.401 2.386 -0.052
ENSG00000077782 E062 9.7203394 0.0022599431 3.138965e-03 1.067415e-02 8 38421942 38422743 802 - 1.171 0.867 -1.120
ENSG00000077782 E063 3.8438225 0.0042204931 3.087447e-01 4.510182e-01 8 38422744 38423024 281 - 0.749 0.606 -0.600
ENSG00000077782 E064 4.1693527 0.0066133431 6.343928e-01 7.488648e-01 8 38423025 38423175 151 - 0.749 0.686 -0.255
ENSG00000077782 E065 1.0340766 0.0181729745 2.226932e-01 3.535933e-01 8 38423313 38423691 379 - 0.404 0.191 -1.472
ENSG00000077782 E066 0.6558305 0.0742320431 7.408502e-01 8.301618e-01 8 38423692 38423726 35 - 0.247 0.191 -0.472
ENSG00000077782 E067 1.8800425 0.0078094095 7.327694e-01 8.241763e-01 8 38423727 38424016 290 - 0.404 0.467 0.333
ENSG00000077782 E068 1.6984544 0.1410069691 9.565326e-02 1.838747e-01 8 38424017 38424216 200 - 0.610 0.261 -1.898
ENSG00000077782 E069 1.1384894 0.3355802851 4.765454e-01 6.151672e-01 8 38424217 38424316 100 - 0.404 0.264 -0.879
ENSG00000077782 E070 1.6712722 0.0095642675 3.880923e-02 8.883275e-02 8 38424317 38424508 192 - 0.610 0.262 -1.892
ENSG00000077782 E071 140.9473524 0.0029735430 2.891730e-01 4.298463e-01 8 38424509 38424527 19 - 2.159 2.123 -0.119
ENSG00000077782 E072 149.2279560 0.0011621106 1.905035e-01 3.143893e-01 8 38424528 38424545 18 - 2.184 2.147 -0.123
ENSG00000077782 E073 124.4221315 0.0004647165 4.761234e-01 6.148109e-01 8 38424546 38424548 3 - 2.091 2.074 -0.057
ENSG00000077782 E074 271.9637396 0.0001880451 3.440003e-03 1.155309e-02 8 38424549 38424682 134 - 2.454 2.395 -0.195
ENSG00000077782 E075 142.3903446 0.0002756438 1.474419e-04 7.360709e-04 8 38424683 38424699 17 - 2.203 2.094 -0.364
ENSG00000077782 E076 117.1610890 0.0006067684 3.795502e-02 8.726609e-02 8 38426122 38426126 5 - 2.093 2.028 -0.218
ENSG00000077782 E077 157.2440745 0.0008705593 7.854746e-06 5.345228e-05 8 38426127 38426157 31 - 2.260 2.128 -0.443
ENSG00000077782 E078 144.7174914 0.0002471077 1.739272e-04 8.523899e-04 8 38426158 38426173 16 - 2.211 2.105 -0.354
ENSG00000077782 E079 134.1910309 0.0002336426 2.419190e-04 1.141405e-03 8 38426174 38426178 5 - 2.179 2.072 -0.358
ENSG00000077782 E080 206.7598618 0.0001959066 5.708944e-04 2.424928e-03 8 38426179 38426245 67 - 2.350 2.270 -0.267
ENSG00000077782 E081 0.0000000       8 38426246 38426585 340 -      
ENSG00000077782 E082 234.4015244 0.0002754645 2.347530e-05 1.432311e-04 8 38427921 38428011 91 - 2.412 2.317 -0.318
ENSG00000077782 E083 223.3867640 0.0008029398 1.785133e-06 1.403619e-05 8 38428012 38428093 82 - 2.405 2.283 -0.408
ENSG00000077782 E084 5.5025241 0.0029214062 7.274846e-03 2.193919e-02 8 38428094 38428345 252 - 0.975 0.635 -1.349
ENSG00000077782 E085 48.2521233 0.0044693119 1.315811e-02 3.627475e-02 8 38428346 38428351 6 - 1.753 1.613 -0.476
ENSG00000077782 E086 133.3006578 0.0008455457 1.867341e-08 2.189529e-07 8 38428352 38428362 11 - 2.212 2.032 -0.604
ENSG00000077782 E087 182.4862241 0.0002373158 5.160910e-08 5.550035e-07 8 38428363 38428435 73 - 2.326 2.187 -0.466
ENSG00000077782 E088 2.2517700 0.0126145746 3.340998e-01 4.778544e-01 8 38428436 38429246 811 - 0.404 0.574 0.842
ENSG00000077782 E089 1.4203125 0.5086973449 5.995494e-01 7.209183e-01 8 38429247 38429390 144 - 0.246 0.433 1.161
ENSG00000077782 E090 0.3299976 0.0274424043 3.099750e-01   8 38429391 38429520 130 - 0.000 0.191 11.995
ENSG00000077782 E091 0.3289534 0.0295196360 8.026658e-01   8 38429521 38429681 161 - 0.141 0.106 -0.475
ENSG00000077782 E092 55.4119663 0.0102489298 9.111752e-01 9.475942e-01 8 38429682 38429719 38 - 1.723 1.739 0.054
ENSG00000077782 E093 56.5080169 0.0075325905 7.369892e-01 8.272846e-01 8 38429720 38429784 65 - 1.747 1.735 -0.041
ENSG00000077782 E094 74.3318475 0.0053506189 8.837943e-01 9.296932e-01 8 38429785 38429922 138 - 1.855 1.857 0.006
ENSG00000077782 E095 48.4121032 0.0004630674 3.339271e-02 7.856032e-02 8 38429923 38429948 26 - 1.735 1.633 -0.346
ENSG00000077782 E096 1.6584824 0.0166843208 1.610262e-01 2.764564e-01 8 38429949 38430820 872 - 0.247 0.506 1.521
ENSG00000077782 E097 0.0000000       8 38440306 38440373 68 -      
ENSG00000077782 E098 1.9325705 0.3414988379 6.965918e-01 7.968891e-01 8 38443397 38443492 96 - 0.521 0.390 -0.672
ENSG00000077782 E099 184.1230306 0.0013227487 2.646429e-06 2.005272e-05 8 38457356 38457441 86 - 2.330 2.190 -0.465
ENSG00000077782 E100 167.2322132 0.0065927619 5.096785e-04 2.195776e-03 8 38457442 38457534 93 - 2.298 2.143 -0.519
ENSG00000077782 E101 0.2214452 0.0383099230 6.607112e-01   8 38458847 38458894 48 - 0.000 0.106 10.954
ENSG00000077782 E102 0.0000000       8 38458895 38458969 75 -      
ENSG00000077782 E103 0.0000000       8 38458970 38458984 15 -      
ENSG00000077782 E104 2.0252152 0.0073207274 9.888548e-01 9.970598e-01 8 38461096 38461255 160 - 0.465 0.467 0.011
ENSG00000077782 E105 0.0000000       8 38463105 38463400 296 -      
ENSG00000077782 E106 0.0000000       8 38465413 38465513 101 -      
ENSG00000077782 E107 0.0000000       8 38465514 38465874 361 -      
ENSG00000077782 E108 0.1817044 0.0399173155 6.612503e-01   8 38466116 38466196 81 - 0.000 0.106 10.944
ENSG00000077782 E109 0.0000000       8 38466542 38466695 154 -      
ENSG00000077782 E110 0.6717251 0.0248843402 1.815287e-01 3.031510e-01 8 38467672 38467900 229 - 0.333 0.106 -2.058
ENSG00000077782 E111 210.6237472 0.0198953553 3.185573e-05 1.883340e-04 8 38467981 38468834 854 - 2.465 2.181 -0.946