ENSG00000076108

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000549884 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding protein_coding 34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 1.059858 2.6038218 0.0000000 0.54849222 0.00000000 -8.030017 0.03356250 0.08410000 0.000000000 -0.08410000 2.897524e-22 3.237271e-41 FALSE TRUE
ENST00000551812 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding protein_coding 34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 17.771256 19.2531534 13.6544360 1.47725114 0.40392359 -0.495418 0.52267083 0.62893333 0.393200000 -0.23573333 1.011542e-05 3.237271e-41 FALSE TRUE
MSTRG.7475.14 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding   34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 1.938904 0.0000000 3.7828140 0.00000000 0.21944282 8.567125 0.05636250 0.00000000 0.108300000 0.10830000 3.237271e-41 3.237271e-41 FALSE TRUE
MSTRG.7475.4 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding   34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 2.970851 0.4642311 6.7933306 0.46423114 0.71128195 3.842579 0.08448333 0.01386667 0.193566667 0.17970000 2.368718e-02 3.237271e-41 FALSE TRUE
MSTRG.7475.7 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding   34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 2.816475 6.4519066 0.2698142 0.84827635 0.07904311 -4.529419 0.08633333 0.20963333 0.007666667 -0.20196667 2.544247e-24 3.237271e-41 FALSE TRUE
MSTRG.7475.8 ENSG00000076108 HEK293_OSMI2_2hA HEK293_TMG_2hB BAZ2A protein_coding   34.1764 30.75914 34.93051 2.916118 1.594378 0.1834168 1.391205 0.1577297 3.3768982 0.08573641 0.27692129 4.335755 0.04069583 0.00480000 0.097766667 0.09296667 2.477244e-08 3.237271e-41 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000076108 E001 0.3299976 0.0274424043 2.180847e-01   12 56595596 56595929 334 - 0.000 0.218 13.403
ENSG00000076108 E002 464.6713630 0.0159844868 2.403793e-17 1.114789e-15 12 56595930 56596426 497 - 2.256 2.845 1.962
ENSG00000076108 E003 16.7404126 0.0192527238 2.437591e-02 6.059418e-02 12 56596427 56596443 17 - 1.080 1.352 0.961
ENSG00000076108 E004 1720.3147014 0.0038777660 4.175633e-23 3.745555e-21 12 56596444 56598358 1915 - 3.031 3.351 1.065
ENSG00000076108 E005 47.3000458 0.0004721441 8.866484e-05 4.687659e-04 12 56598359 56598379 21 - 1.529 1.767 0.811
ENSG00000076108 E006 257.7435388 0.0002038773 5.056497e-17 2.250795e-15 12 56598380 56598554 175 - 2.268 2.496 0.760
ENSG00000076108 E007 116.2231992 0.0029151894 8.998262e-09 1.118639e-07 12 56598555 56598555 1 - 1.890 2.170 0.940
ENSG00000076108 E008 123.1177066 0.0027301513 3.057377e-08 3.435415e-07 12 56598556 56598556 1 - 1.926 2.189 0.882
ENSG00000076108 E009 152.6729320 0.0029878947 7.347255e-10 1.117376e-08 12 56598557 56598572 16 - 2.008 2.288 0.935
ENSG00000076108 E010 375.8605180 0.0030954018 2.154755e-08 2.496556e-07 12 56598573 56598783 211 - 2.440 2.658 0.728
ENSG00000076108 E011 274.6925322 0.0002849727 7.417884e-11 1.336468e-09 12 56598868 56599011 144 - 2.325 2.506 0.605
ENSG00000076108 E012 359.5391633 0.0003912877 1.267921e-06 1.029990e-05 12 56599129 56599355 227 - 2.470 2.604 0.447
ENSG00000076108 E013 132.2626005 0.0002696469 7.458828e-02 1.508769e-01 12 56599356 56599358 3 - 2.065 2.153 0.294
ENSG00000076108 E014 299.6161974 0.0025209736 1.647176e-01 2.813194e-01 12 56599702 56599848 147 - 2.424 2.506 0.273
ENSG00000076108 E015 260.3366706 0.0005879334 1.767973e-01 2.970776e-01 12 56599964 56600096 133 - 2.372 2.438 0.219
ENSG00000076108 E016 4.4919739 0.0038927034 1.200502e-01 2.200575e-01 12 56600097 56600117 21 - 0.593 0.837 1.008
ENSG00000076108 E017 385.9752631 0.0001323057 5.623794e-01 6.899927e-01 12 56600201 56600467 267 - 2.559 2.601 0.140
ENSG00000076108 E018 159.0168060 0.0002143437 1.248728e-01 2.269453e-01 12 56600468 56600490 23 - 2.157 2.232 0.251
ENSG00000076108 E019 229.9511737 0.0001754757 3.247824e-01 4.681864e-01 12 56600681 56600743 63 - 2.327 2.382 0.183
ENSG00000076108 E020 280.8009932 0.0001827754 7.575675e-01 8.423508e-01 12 56600744 56600832 89 - 2.429 2.454 0.082
ENSG00000076108 E021 318.8351701 0.0001662411 4.942281e-01 6.311896e-01 12 56600943 56601086 144 - 2.489 2.506 0.058
ENSG00000076108 E022 125.6427717 0.0007204303 4.002051e-02 9.107445e-02 12 56601087 56601098 12 - 2.119 2.081 -0.125
ENSG00000076108 E023 207.3047670 0.0002215006 9.524255e-02 1.832377e-01 12 56601180 56601245 66 - 2.320 2.309 -0.036
ENSG00000076108 E024 256.0795863 0.0001680438 4.208934e-01 5.640504e-01 12 56601246 56601402 157 - 2.397 2.410 0.044
ENSG00000076108 E025 1.8540974 0.0082808499 1.466879e-03 5.529606e-03 12 56601403 56601529 127 - 0.660 0.123 -3.450
ENSG00000076108 E026 565.0440142 0.0006201601 2.031017e-01 3.301104e-01 12 56601546 56602192 647 - 2.742 2.752 0.031
ENSG00000076108 E027 210.2286275 0.0004181011 6.351986e-01 7.495545e-01 12 56602713 56602857 145 - 2.308 2.327 0.063
ENSG00000076108 E028 146.0897927 0.0026510741 8.407528e-01 9.006090e-01 12 56603359 56603418 60 - 2.139 2.179 0.134
ENSG00000076108 E029 276.6444736 0.0011583298 6.282622e-03 1.935418e-02 12 56603520 56603700 181 - 2.458 2.419 -0.131
ENSG00000076108 E030 135.3575302 0.0026213624 3.615444e-03 1.205426e-02 12 56604217 56604239 23 - 2.172 2.092 -0.268
ENSG00000076108 E031 156.6449527 0.0033351843 1.784613e-02 4.680478e-02 12 56604240 56604291 52 - 2.224 2.165 -0.195
ENSG00000076108 E032 232.9478684 0.0055082450 2.092581e-02 5.343269e-02 12 56604585 56604799 215 - 2.396 2.338 -0.194
ENSG00000076108 E033 8.1352263 0.0398388144 1.498320e-04 7.462528e-04 12 56604800 56605072 273 - 1.174 0.630 -2.092
ENSG00000076108 E034 189.2006071 0.0016303017 1.738216e-02 4.578186e-02 12 56605073 56605214 142 - 2.296 2.254 -0.141
ENSG00000076108 E035 99.8959369 0.0003383694 3.611377e-03 1.204256e-02 12 56605215 56605227 13 - 2.038 1.964 -0.246
ENSG00000076108 E036 179.6722989 0.0006017471 4.087330e-03 1.338703e-02 12 56605228 56605327 100 - 2.278 2.228 -0.168
ENSG00000076108 E037 1.3338852 0.0102819050 4.288223e-01 5.715509e-01 12 56605328 56605829 502 - 0.419 0.297 -0.727
ENSG00000076108 E038 222.2276369 0.0018439678 2.167149e-02 5.499429e-02 12 56605830 56605991 162 - 2.366 2.327 -0.131
ENSG00000076108 E039 162.7149634 0.0093452129 2.143978e-02 5.451459e-02 12 56605992 56606063 72 - 2.259 2.165 -0.313
ENSG00000076108 E040 165.0145238 0.0068564828 1.072929e-04 5.557130e-04 12 56606247 56606312 66 - 2.291 2.140 -0.504
ENSG00000076108 E041 3.0830770 0.1326434045 8.273003e-01 8.914256e-01 12 56606313 56606395 83 - 0.556 0.659 0.457
ENSG00000076108 E042 0.2998086 0.0310616328 9.612418e-01   12 56606396 56606412 17 - 0.122 0.122 0.006
ENSG00000076108 E043 190.5981091 0.0059291569 2.660514e-07 2.488896e-06 12 56606633 56606733 101 - 2.375 2.177 -0.660
ENSG00000076108 E044 223.4474116 0.0021913455 1.017384e-12 2.495667e-11 12 56609736 56609937 202 - 2.443 2.244 -0.664
ENSG00000076108 E045 65.8139099 0.0003987522 4.494517e-06 3.233973e-05 12 56609938 56609946 9 - 1.902 1.732 -0.575
ENSG00000076108 E046 66.5048445 0.0003861337 3.023052e-08 3.400274e-07 12 56610114 56610116 3 - 1.925 1.713 -0.714
ENSG00000076108 E047 144.9022996 0.0036420269 2.652308e-07 2.481955e-06 12 56610117 56610215 99 - 2.247 2.069 -0.595
ENSG00000076108 E048 184.3053342 0.0049831552 1.415189e-06 1.137477e-05 12 56610409 56610517 109 - 2.348 2.178 -0.566
ENSG00000076108 E049 2.8430339 0.1876618289 9.294375e-02 1.797331e-01 12 56610518 56610539 22 - 0.744 0.367 -1.776
ENSG00000076108 E050 3.4095706 0.2372217997 1.450836e-02 3.938225e-02 12 56611295 56611572 278 - 0.875 0.289 -2.779
ENSG00000076108 E051 141.5988114 0.0111991175 3.252477e-04 1.481967e-03 12 56611573 56611633 61 - 2.234 2.064 -0.569
ENSG00000076108 E052 401.6344993 0.0048257282 1.238282e-11 2.539665e-10 12 56611773 56612246 474 - 2.706 2.490 -0.721
ENSG00000076108 E053 73.7449884 0.0087504134 3.070371e-03 1.047342e-02 12 56613015 56613017 3 - 1.943 1.798 -0.486
ENSG00000076108 E054 209.1746217 0.0083483724 4.286110e-05 2.453589e-04 12 56613018 56613233 216 - 2.403 2.236 -0.558
ENSG00000076108 E055 196.6825302 0.0082270194 4.864892e-07 4.311762e-06 12 56613953 56614138 186 - 2.397 2.181 -0.720
ENSG00000076108 E056 0.5181333 0.0207962272 5.301465e-01 6.628027e-01 12 56614139 56614306 168 - 0.217 0.123 -0.989
ENSG00000076108 E057 178.3732803 0.0010773459 3.123349e-17 1.429594e-15 12 56615014 56615128 115 - 2.357 2.129 -0.761
ENSG00000076108 E058 140.9090876 0.0014128241 3.922010e-14 1.181261e-12 12 56615129 56615218 90 - 2.257 2.026 -0.773
ENSG00000076108 E059 160.9303294 0.0063166414 5.739792e-07 5.020715e-06 12 56615219 56615308 90 - 2.303 2.101 -0.674
ENSG00000076108 E060 124.9844361 0.0038375006 1.147426e-08 1.399449e-07 12 56615309 56615348 40 - 2.200 1.983 -0.725
ENSG00000076108 E061 137.4617992 0.0054972876 1.144050e-08 1.395691e-07 12 56615349 56615395 47 - 2.248 2.014 -0.785
ENSG00000076108 E062 160.8284217 0.0013945718 2.786917e-23 2.545675e-21 12 56615396 56615520 125 - 2.343 2.043 -1.004
ENSG00000076108 E063 108.6361439 0.0020203851 7.050310e-17 3.092521e-15 12 56615521 56615607 87 - 2.175 1.868 -1.030
ENSG00000076108 E064 91.0425567 0.0099770014 1.964043e-06 1.530509e-05 12 56617395 56617532 138 - 2.078 1.823 -0.855
ENSG00000076108 E065 0.0000000       12 56629973 56630124 152 -      
ENSG00000076108 E066 43.3569776 0.0144566119 3.304429e-04 1.502566e-03 12 56630125 56630329 205 - 1.757 1.509 -0.843
ENSG00000076108 E067 10.7776225 0.0139086557 6.231555e-02 1.305426e-01 12 56630776 56630841 66 - 1.155 0.978 -0.644
ENSG00000076108 E068 7.3073408 0.0026472485 2.385314e-02 5.950346e-02 12 56630842 56630865 24 - 1.031 0.794 -0.898
ENSG00000076108 E069 5.7531141 0.0028796547 9.009664e-02 1.752849e-01 12 56634945 56635080 136 - 0.911 0.720 -0.749
ENSG00000076108 E070 6.3806441 0.0342672716 1.294727e-01 2.334264e-01 12 56636182 56636293 112 - 0.960 0.771 -0.728
ENSG00000076108 E071 3.8427053 0.0733672048 2.565863e-01 3.935641e-01 12 56636294 56636379 86 - 0.769 0.596 -0.728
ENSG00000076108 E072 0.0000000       12 56636729 56636816 88 -      
ENSG00000076108 E073 0.0000000       12 56636817 56636905 89 -