ENSG00000074755

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000381638 ENSG00000074755 HEK293_OSMI2_2hA HEK293_TMG_2hB ZZEF1 protein_coding protein_coding 10.45635 10.19168 8.645331 1.016309 0.5184168 -0.2371457 6.093975 8.2565245 4.410499 0.6438657 0.25753263 -0.9030717 0.5700042 0.8141 0.5113000 -0.3028000 5.714604e-08 5.714604e-08 FALSE TRUE
MSTRG.13446.2 ENSG00000074755 HEK293_OSMI2_2hA HEK293_TMG_2hB ZZEF1 protein_coding   10.45635 10.19168 8.645331 1.016309 0.5184168 -0.2371457 1.639318 0.3165146 2.077746 0.3165146 0.06616482 2.6767267 0.1675042 0.0271 0.2425333 0.2154333 4.261143e-02 5.714604e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000074755 E001 183.5120472 0.0064163635 1.433998e-10 2.465215e-09 17 4004445 4004974 530 - 2.012 2.355 1.146
ENSG00000074755 E002 682.6083976 0.0112331242 5.381486e-08 5.760574e-07 17 4004975 4006504 1530 - 2.616 2.914 0.994
ENSG00000074755 E003 84.9527801 0.0004288559 6.597475e-09 8.413812e-08 17 4006505 4006561 57 - 1.732 2.005 0.921
ENSG00000074755 E004 85.7830007 0.0003479562 5.236074e-09 6.807292e-08 17 4006562 4006623 62 - 1.735 2.008 0.920
ENSG00000074755 E005 104.8418218 0.0020675709 1.836433e-08 2.156893e-07 17 4006624 4006692 69 - 1.822 2.094 0.916
ENSG00000074755 E006 196.8296192 0.0018846000 5.250992e-09 6.824813e-08 17 4006693 4006970 278 - 2.127 2.355 0.762
ENSG00000074755 E007 17.9416296 0.0009983270 8.631613e-02 1.695069e-01 17 4008260 4008882 623 - 1.328 1.218 -0.384
ENSG00000074755 E008 87.4903314 0.0003209238 6.707246e-03 2.046299e-02 17 4008883 4008954 72 - 1.841 1.978 0.461
ENSG00000074755 E009 2.8335801 0.0055300186 3.404895e-01 4.844370e-01 17 4008955 4009603 649 - 0.641 0.513 -0.580
ENSG00000074755 E010 114.5726583 0.0002991188 1.878881e-04 9.118699e-04 17 4009604 4009757 154 - 1.941 2.102 0.539
ENSG00000074755 E011 118.8506438 0.0025219764 4.405535e-03 1.427938e-02 17 4013449 4013614 166 - 1.961 2.111 0.502
ENSG00000074755 E012 103.3369508 0.0012042866 7.462107e-04 3.065008e-03 17 4014090 4014188 99 - 1.894 2.057 0.549
ENSG00000074755 E013 61.1570045 0.0108031719 7.045045e-02 1.440869e-01 17 4014347 4014377 31 - 1.677 1.831 0.520
ENSG00000074755 E014 119.3963865 0.0036167961 1.834305e-04 8.925911e-04 17 4014378 4014515 138 - 1.936 2.132 0.658
ENSG00000074755 E015 103.4821350 0.0041590225 6.032775e-03 1.869760e-02 17 4016323 4016466 144 - 1.900 2.064 0.549
ENSG00000074755 E016 3.1531735 0.0681010118 1.255334e-02 3.485891e-02 17 4016467 4016632 166 - 0.821 0.384 -1.983
ENSG00000074755 E017 1.7641047 0.1471098446 2.552570e-01 3.920966e-01 17 4016633 4016774 142 - 0.559 0.329 -1.210
ENSG00000074755 E018 3.0602487 0.0122391722 9.377840e-01 9.648952e-01 17 4016775 4017370 596 - 0.602 0.613 0.045
ENSG00000074755 E019 121.1075187 0.0003027962 5.439288e-03 1.712320e-02 17 4017371 4017647 277 - 1.992 2.116 0.415
ENSG00000074755 E020 66.5638611 0.0051926342 3.620386e-01 5.064397e-01 17 4017648 4017730 83 - 1.767 1.847 0.272
ENSG00000074755 E021 84.9742876 0.0030696246 3.522742e-01 4.965387e-01 17 4017836 4017971 136 - 1.875 1.950 0.252
ENSG00000074755 E022 78.0046677 0.0046860995 1.072449e-01 2.014569e-01 17 4019669 4019769 101 - 1.809 1.925 0.392
ENSG00000074755 E023 0.6632043 0.0259897908 5.049740e-01 6.408224e-01 17 4019770 4020012 243 - 0.138 0.266 1.172
ENSG00000074755 E024 107.4386199 0.0007002064 2.304562e-01 3.630011e-01 17 4021129 4021320 192 - 1.973 2.047 0.247
ENSG00000074755 E025 0.1482932 0.0424711658 6.672527e-01   17 4022416 4022416 1 - 0.000 0.108 17.873
ENSG00000074755 E026 3.7619723 0.0218656850 1.624477e-01 2.783351e-01 17 4022417 4022708 292 - 0.512 0.761 1.082
ENSG00000074755 E027 83.5264281 0.0003454560 4.689342e-02 1.036388e-01 17 4022709 4022828 120 - 1.843 1.952 0.368
ENSG00000074755 E028 105.0629719 0.0004066602 3.024095e-02 7.244084e-02 17 4024919 4025118 200 - 1.937 2.046 0.365
ENSG00000074755 E029 81.9446895 0.0052217520 6.854365e-01 7.881703e-01 17 4032126 4032258 133 - 1.868 1.921 0.176
ENSG00000074755 E030 87.0544836 0.0028972696 1.869670e-01 3.099190e-01 17 4032828 4033002 175 - 1.866 1.960 0.315
ENSG00000074755 E031 1.0611596 0.0746033211 2.405940e-02 5.993637e-02 17 4033003 4033359 357 - 0.512 0.108 -2.993
ENSG00000074755 E032 3.0978892 0.0049858437 5.900022e-02 1.249250e-01 17 4033531 4034014 484 - 0.741 0.474 -1.188
ENSG00000074755 E033 117.0044210 0.0078619175 4.958610e-01 6.326055e-01 17 4034015 4034292 278 - 2.007 2.083 0.256
ENSG00000074755 E034 80.2328129 0.0024123319 7.010071e-01 8.003453e-01 17 4042429 4042568 140 - 1.883 1.896 0.044
ENSG00000074755 E035 83.7928855 0.0003542380 1.136411e-01 2.108367e-01 17 4044224 4044374 151 - 1.932 1.899 -0.110
ENSG00000074755 E036 76.0376960 0.0003546106 3.720645e-02 8.586474e-02 17 4049708 4049859 152 - 1.904 1.848 -0.189
ENSG00000074755 E037 84.2601137 0.0003595623 4.231723e-03 1.379023e-02 17 4050781 4051043 263 - 1.966 1.884 -0.276
ENSG00000074755 E038 71.9387364 0.0013314297 1.328537e-02 3.658192e-02 17 4051971 4052136 166 - 1.898 1.817 -0.272
ENSG00000074755 E039 60.7950082 0.0107535023 5.563894e-01 6.850459e-01 17 4054057 4054195 139 - 1.781 1.778 -0.007
ENSG00000074755 E040 66.8996065 0.0031359097 2.320518e-01 3.648750e-01 17 4056216 4056345 130 - 1.834 1.805 -0.095
ENSG00000074755 E041 69.9837742 0.0058276536 1.067978e-01 2.008251e-01 17 4057994 4058155 162 - 1.870 1.815 -0.186
ENSG00000074755 E042 57.6429030 0.0058507621 6.449392e-03 1.979133e-02 17 4059171 4059290 120 - 1.824 1.699 -0.424
ENSG00000074755 E043 51.3072028 0.0081347999 6.273399e-03 1.932934e-02 17 4062753 4062917 165 - 1.783 1.641 -0.480
ENSG00000074755 E044 79.2225069 0.0003659384 8.118761e-06 5.505906e-05 17 4064361 4064798 438 - 1.973 1.825 -0.500
ENSG00000074755 E045 30.0771728 0.0009919711 2.907918e-04 1.342438e-03 17 4064799 4064829 31 - 1.590 1.388 -0.693
ENSG00000074755 E046 41.0339443 0.0145811021 8.321408e-02 1.646028e-01 17 4066447 4066536 90 - 1.669 1.565 -0.357
ENSG00000074755 E047 21.2038355 0.0039261040 9.961587e-01 1.000000e+00 17 4066537 4066540 4 - 1.312 1.341 0.101
ENSG00000074755 E048 37.5339485 0.0229757468 2.886082e-01 4.292156e-01 17 4067163 4067242 80 - 1.614 1.544 -0.239
ENSG00000074755 E049 37.7868169 0.0238631442 2.116563e-01 3.404441e-01 17 4070684 4070778 95 - 1.621 1.540 -0.279
ENSG00000074755 E050 26.5010401 0.0053880801 3.295695e-02 7.771808e-02 17 4070779 4070810 32 - 1.497 1.369 -0.442
ENSG00000074755 E051 47.3900295 0.0005455165 1.206130e-05 7.864048e-05 17 4070811 4070924 114 - 1.778 1.583 -0.660
ENSG00000074755 E052 3.0290803 0.0476101668 7.059329e-04 2.920019e-03 17 4071339 4071446 108 - 0.845 0.268 -2.812
ENSG00000074755 E053 46.7333635 0.0008396989 1.267448e-08 1.532766e-07 17 4072608 4072756 149 - 1.806 1.539 -0.907
ENSG00000074755 E054 0.0000000       17 4072757 4072827 71 -      
ENSG00000074755 E055 60.4484455 0.0004161711 7.527422e-09 9.490533e-08 17 4074150 4074351 202 - 1.900 1.667 -0.787
ENSG00000074755 E056 45.5913086 0.0004892654 2.857243e-05 1.707882e-04 17 4075097 4075178 82 - 1.758 1.570 -0.639
ENSG00000074755 E057 0.3289534 0.0285485469 7.969437e-01   17 4075179 4075180 2 - 0.138 0.108 -0.411
ENSG00000074755 E058 58.5432699 0.0070144464 4.963782e-02 1.085230e-01 17 4075263 4075429 167 - 1.812 1.727 -0.284
ENSG00000074755 E059 0.1482932 0.0424711658 6.672527e-01   17 4075952 4076636 685 - 0.000 0.108 17.873
ENSG00000074755 E060 40.4142834 0.0416789149 1.258239e-02 3.492851e-02 17 4076637 4076759 123 - 1.731 1.502 -0.779
ENSG00000074755 E061 43.5604586 0.0150361074 9.439538e-04 3.767840e-03 17 4076868 4076989 122 - 1.761 1.537 -0.760
ENSG00000074755 E062 44.7207488 0.0036736799 2.172221e-08 2.515870e-07 17 4077883 4078042 160 - 1.804 1.503 -1.021
ENSG00000074755 E063 34.8341264 0.0006020779 1.888625e-05 1.178156e-04 17 4081376 4081490 115 - 1.660 1.436 -0.766
ENSG00000074755 E064 28.5026254 0.0006934897 1.148625e-03 4.466595e-03 17 4082437 4082504 68 - 1.555 1.373 -0.628
ENSG00000074755 E065 18.1695349 0.0009867747 7.599477e-03 2.276958e-02 17 4082505 4082507 3 - 1.371 1.187 -0.645
ENSG00000074755 E066 44.2872719 0.0024035148 8.198009e-08 8.466926e-07 17 4085670 4085803 134 - 1.788 1.514 -0.933
ENSG00000074755 E067 37.5712678 0.0057369248 3.662878e-09 4.887802e-08 17 4086486 4086655 170 - 1.761 1.398 -1.240
ENSG00000074755 E068 23.7919251 0.0166633163 7.783178e-03 2.323547e-02 17 4087434 4087534 101 - 1.497 1.289 -0.722
ENSG00000074755 E069 40.5713972 0.0057154421 1.167239e-04 5.988460e-04 17 4088678 4088893 216 - 1.723 1.504 -0.743
ENSG00000074755 E070 43.1402198 0.0058247725 3.597143e-05 2.096631e-04 17 4090719 4090830 112 - 1.755 1.523 -0.789
ENSG00000074755 E071 45.2509831 0.0354239668 4.227693e-04 1.861531e-03 17 4095831 4095979 149 - 1.820 1.497 -1.097
ENSG00000074755 E072 32.1306658 0.0027939098 1.452356e-07 1.429916e-06 17 4096609 4096700 92 - 1.670 1.357 -1.073
ENSG00000074755 E073 33.7519791 0.0006187311 1.641656e-11 3.300061e-10 17 4102317 4102415 99 - 1.716 1.340 -1.289
ENSG00000074755 E074 42.5047499 0.0071859666 1.800744e-09 2.544533e-08 17 4104633 4104811 179 - 1.814 1.442 -1.268
ENSG00000074755 E075 35.1890340 0.0005858564 4.962376e-07 4.391383e-06 17 4105693 4105809 117 - 1.687 1.422 -0.907
ENSG00000074755 E076 38.3957463 0.0093179528 3.589863e-07 3.268243e-06 17 4109653 4109863 211 - 1.753 1.417 -1.147
ENSG00000074755 E077 37.6236206 0.0082173646 5.912745e-10 9.150072e-09 17 4112609 4112808 200 - 1.778 1.369 -1.397
ENSG00000074755 E078 39.1955138 0.0331247966 1.254204e-04 6.385861e-04 17 4114299 4114470 172 - 1.784 1.404 -1.299
ENSG00000074755 E079 42.0159217 0.0327260825 1.875987e-03 6.841195e-03 17 4116972 4117166 195 - 1.774 1.481 -0.995
ENSG00000074755 E080 27.4387443 0.0018752386 2.839427e-07 2.640788e-06 17 4123907 4124051 145 - 1.602 1.281 -1.109
ENSG00000074755 E081 31.4702303 0.0011944735 2.071213e-09 2.891563e-08 17 4142542 4143030 489 - 1.677 1.329 -1.195
ENSG00000074755 E082 5.4604769 0.0034025835 1.323367e-01 2.373521e-01 17 4143549 4143692 144 - 0.890 0.719 -0.673