• ENSG00000071575
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000071575

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000155926 ENSG00000071575 HEK293_OSMI2_2hA HEK293_TMG_2hB TRIB2 protein_coding protein_coding 3.209427 4.182575 3.304874 0.07434 0.2610192 -0.3388827 0.7755044 0.6756322 1.2188064 0.08894255 0.1588300 0.8417509 0.25370833 0.16233333 0.3750333 0.2127000 0.02727023 0.02727023 FALSE TRUE
ENST00000381465 ENSG00000071575 HEK293_OSMI2_2hA HEK293_TMG_2hB TRIB2 protein_coding protein_coding 3.209427 4.182575 3.304874 0.07434 0.2610192 -0.3388827 0.8987779 1.4095633 0.6563021 0.20243391 0.3424483 -1.0911989 0.27552917 0.33656667 0.1890000 -0.1475667 0.64767357 0.02727023 FALSE TRUE
ENST00000405331 ENSG00000071575 HEK293_OSMI2_2hA HEK293_TMG_2hB TRIB2 protein_coding protein_coding 3.209427 4.182575 3.304874 0.07434 0.2610192 -0.3388827 0.6545662 1.5190288 0.6860292 0.17452903 0.1438390 -1.1353958 0.18565417 0.36360000 0.2064000 -0.1572000 0.15131140 0.02727023 FALSE TRUE
MSTRG.17982.1 ENSG00000071575 HEK293_OSMI2_2hA HEK293_TMG_2hB TRIB2 protein_coding   3.209427 4.182575 3.304874 0.07434 0.2610192 -0.3388827 0.1664189 0.1797828 0.0000000 0.09945711 0.0000000 -4.2462777 0.05069583 0.04350000 0.0000000 -0.0435000 0.15804712 0.02727023 FALSE TRUE
MSTRG.17982.3 ENSG00000071575 HEK293_OSMI2_2hA HEK293_TMG_2hB TRIB2 protein_coding   3.209427 4.182575 3.304874 0.07434 0.2610192 -0.3388827 0.5448547 0.1050453 0.5346216 0.10504531 0.2741640 2.2430520 0.18142917 0.02443333 0.1609000 0.1364667 0.50624149 0.02727023 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000071575 E001 0.4804688 0.0222030841 0.5085611490 0.643950581 2 12716907 12716909 3 + 0.225 0.118 -1.116
ENSG00000071575 E002 0.4804688 0.0222030841 0.5085611490 0.643950581 2 12716910 12716918 9 + 0.225 0.118 -1.118
ENSG00000071575 E003 1.3608650 0.0264628038 0.5842133928 0.708174689 2 12716919 12716934 16 + 0.305 0.409 0.621
ENSG00000071575 E004 1.3608650 0.0264628038 0.5842133928 0.708174689 2 12716935 12716935 1 + 0.305 0.409 0.621
ENSG00000071575 E005 1.3608650 0.0264628038 0.5842133928 0.708174689 2 12716936 12716939 4 + 0.305 0.409 0.621
ENSG00000071575 E006 1.3608650 0.0264628038 0.5842133928 0.708174689 2 12716940 12716947 8 + 0.305 0.409 0.621
ENSG00000071575 E007 3.0946801 0.0188575714 0.3850220044 0.529184225 2 12716948 12717010 63 + 0.675 0.544 -0.575
ENSG00000071575 E008 8.5061568 0.0022733902 0.0143518695 0.039029034 2 12717011 12717251 241 + 1.098 0.841 -0.957
ENSG00000071575 E009 14.3087740 0.0101882165 0.2622995662 0.400076211 2 12717252 12717639 388 + 1.237 1.140 -0.347
ENSG00000071575 E010 4.7326497 0.0037921325 0.3982771663 0.542012056 2 12717640 12717685 46 + 0.675 0.800 0.510
ENSG00000071575 E011 7.5672791 0.0022222842 0.1651830441 0.281923266 2 12717686 12717849 164 + 1.007 0.860 -0.551
ENSG00000071575 E012 21.0357096 0.0011157483 0.0614065641 0.128999339 2 12717850 12718128 279 + 1.405 1.281 -0.430
ENSG00000071575 E013 9.8388037 0.0019400372 0.6740736290 0.779607250 2 12718129 12718237 109 + 1.048 1.016 -0.118
ENSG00000071575 E014 15.6636317 0.0012731180 0.9863967336 0.995535097 2 12718238 12718321 84 + 1.211 1.221 0.034
ENSG00000071575 E015 33.0501740 0.0007312202 0.2796201638 0.419383757 2 12718322 12718577 256 + 1.555 1.504 -0.175
ENSG00000071575 E016 36.1733895 0.0040533725 0.6815451013 0.785194965 2 12723260 12723552 293 + 1.547 1.584 0.127
ENSG00000071575 E017 5.8863336 0.0041744520 0.0005332251 0.002284026 2 12724629 12724825 197 + 0.482 0.975 2.054
ENSG00000071575 E018 183.3412980 0.0037776173 0.1261291082 0.228765461 2 12740326 12742734 2409 + 2.238 2.283 0.152