ENSG00000069424

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000445501 ENSG00000069424 HEK293_OSMI2_2hA HEK293_TMG_2hB KCNAB2 protein_coding protein_coding 5.971652 8.958251 4.830591 0.5036027 0.3289264 -0.8896436 0.3573772 0.000000 0.8471515 0.0000000 0.4294099 6.4214784 0.07089583 0.0000000 0.1668000 0.16680000 0.11594535 0.01309886 FALSE FALSE
ENST00000655748 ENSG00000069424 HEK293_OSMI2_2hA HEK293_TMG_2hB KCNAB2 protein_coding processed_transcript 5.971652 8.958251 4.830591 0.5036027 0.3289264 -0.8896436 0.9942670 1.905454 0.1750408 0.3181783 0.0895143 -3.3717708 0.15750417 0.2133333 0.0344000 -0.17893333 0.01529293 0.01309886 FALSE FALSE
ENST00000666163 ENSG00000069424 HEK293_OSMI2_2hA HEK293_TMG_2hB KCNAB2 protein_coding protein_coding 5.971652 8.958251 4.830591 0.5036027 0.3289264 -0.8896436 3.1005675 4.356744 2.7667919 0.3926339 0.3620593 -0.6531388 0.52103750 0.4850000 0.5743333 0.08933333 0.59566975 0.01309886 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000069424 E001 0.0000000       1 5990927 5991043 117 +      
ENSG00000069424 E002 0.2903454 0.3649112991 1.410776e-01   1 5991320 5991556 237 + 0.272 0.000 -12.134
ENSG00000069424 E003 1.7285271 0.0082296043 7.229102e-01 8.169076e-01 1 5992262 5992638 377 + 0.364 0.431 0.369
ENSG00000069424 E004 1.4446131 0.0109993551 9.015819e-01 9.412903e-01 1 5992639 5992665 27 + 0.364 0.345 -0.114
ENSG00000069424 E005 1.8047996 0.0081333665 2.922591e-01 4.332127e-01 1 5992666 5992670 5 + 0.273 0.468 1.148
ENSG00000069424 E006 2.2529014 0.0064516380 3.433933e-01 4.874298e-01 1 5992671 5992674 4 + 0.364 0.534 0.883
ENSG00000069424 E007 2.2529014 0.0064516380 3.433933e-01 4.874298e-01 1 5992675 5992684 10 + 0.364 0.534 0.883
ENSG00000069424 E008 4.2059810 0.0039925278 1.248130e-01 2.268594e-01 1 5992685 5992692 8 + 0.503 0.748 1.073
ENSG00000069424 E009 4.8649320 0.0034864819 1.126371e-01 2.094007e-01 1 5992693 5992702 10 + 0.559 0.801 1.021
ENSG00000069424 E010 5.3766339 0.0031280592 5.301910e-02 1.145186e-01 1 5992703 5992705 3 + 0.559 0.848 1.205
ENSG00000069424 E011 5.6690556 0.0029712834 1.737261e-01 2.930293e-01 1 5992706 5992710 5 + 0.653 0.848 0.790
ENSG00000069424 E012 7.5804224 0.0022296149 9.768424e-01 9.895501e-01 1 5992711 5992713 3 + 0.903 0.904 0.004
ENSG00000069424 E013 8.1318652 0.0020869371 7.717867e-01 8.526813e-01 1 5992714 5992722 9 + 0.903 0.942 0.146
ENSG00000069424 E014 9.1617005 0.0018786518 7.583966e-01 8.430157e-01 1 5992723 5992730 8 + 0.948 0.987 0.146
ENSG00000069424 E015 13.8020944 0.0013530277 6.489092e-01 7.602920e-01 1 5992731 5992752 22 + 1.108 1.156 0.173
ENSG00000069424 E016 14.0257177 0.0013444261 9.391066e-01 9.657654e-01 1 5992753 5992759 7 + 1.136 1.148 0.043
ENSG00000069424 E017 20.7341605 0.0009079880 5.542575e-01 6.832648e-01 1 5992760 5992788 29 + 1.267 1.319 0.182
ENSG00000069424 E018 2.6397820 0.3134465842 7.274522e-01 8.201623e-01 1 5995863 5996084 222 + 0.611 0.481 -0.606
ENSG00000069424 E019 0.1817044 0.0390558934 8.597389e-01   1 6007439 6007660 222 + 0.000 0.094 12.086
ENSG00000069424 E020 12.1420699 0.0421933735 9.706781e-03 2.803874e-02 1 6018635 6018835 201 + 0.796 1.185 1.447
ENSG00000069424 E021 5.8444278 0.0029188730 2.606180e-03 9.082821e-03 1 6018836 6018968 133 + 0.439 0.904 2.005
ENSG00000069424 E022 0.0000000       1 6026013 6026162 150 +      
ENSG00000069424 E023 0.0000000       1 6026163 6026271 109 +      
ENSG00000069424 E024 0.0000000       1 6026272 6026274 3 +      
ENSG00000069424 E025 0.0000000       1 6026275 6026275 1 +      
ENSG00000069424 E026 0.0000000       1 6026276 6026293 18 +      
ENSG00000069424 E027 0.0000000       1 6026294 6026319 26 +      
ENSG00000069424 E028 0.0000000       1 6026320 6026326 7 +      
ENSG00000069424 E029 0.0000000       1 6026327 6026333 7 +      
ENSG00000069424 E030 0.0000000       1 6026334 6026344 11 +      
ENSG00000069424 E031 0.0000000       1 6026345 6026346 2 +      
ENSG00000069424 E032 0.0000000       1 6026347 6026360 14 +      
ENSG00000069424 E033 0.0000000       1 6026361 6026445 85 +      
ENSG00000069424 E034 0.2214452 0.0373830934 8.594453e-01   1 6027297 6027355 59 + 0.000 0.094 12.094
ENSG00000069424 E035 0.2214452 0.0373830934 8.594453e-01   1 6027356 6027459 104 + 0.000 0.094 12.094
ENSG00000069424 E036 0.0000000       1 6034283 6034676 394 +      
ENSG00000069424 E037 0.0000000       1 6034677 6034794 118 +      
ENSG00000069424 E038 0.1817044 0.0390558934 8.597389e-01   1 6034795 6034963 169 + 0.000 0.094 12.086
ENSG00000069424 E039 0.0000000       1 6034980 6035089 110 +      
ENSG00000069424 E040 0.0000000       1 6035090 6035172 83 +      
ENSG00000069424 E041 0.0000000       1 6035917 6036048 132 +      
ENSG00000069424 E042 28.6383569 0.0009216668 7.025771e-02 1.437905e-01 1 6040517 6040645 129 + 1.512 1.398 -0.394
ENSG00000069424 E043 0.0000000       1 6041168 6041830 663 +      
ENSG00000069424 E044 9.1669729 0.0019413696 9.802602e-01 9.916674e-01 1 6041831 6041872 42 + 0.969 0.977 0.028
ENSG00000069424 E045 0.1515154 0.0420826241 2.709712e-01   1 6045888 6046113 226 + 0.158 0.000 -13.895
ENSG00000069424 E046 0.0000000       1 6046114 6046183 70 +      
ENSG00000069424 E047 0.0000000       1 6046184 6046357 174 +      
ENSG00000069424 E048 0.4782907 0.0230171458 2.240248e-01 3.552218e-01 1 6051511 6051754 244 + 0.000 0.237 13.643
ENSG00000069424 E049 0.4428904 0.3805814280 5.220587e-01 6.559301e-01 1 6065753 6066276 524 + 0.000 0.178 12.590
ENSG00000069424 E050 27.7171478 0.0108607871 1.262768e-01 2.289697e-01 1 6072755 6072798 44 + 1.500 1.379 -0.416
ENSG00000069424 E051 0.0000000       1 6073354 6073384 31 +      
ENSG00000069424 E052 0.3299976 0.0278213471 4.185829e-01   1 6073415 6073732 318 + 0.000 0.171 13.080
ENSG00000069424 E053 31.0102966 0.0011011161 2.308051e-02 5.791555e-02 1 6073733 6073770 38 + 1.562 1.422 -0.479
ENSG00000069424 E054 0.2966881 0.0294730979 8.218704e-02   1 6073771 6074791 1021 + 0.273 0.000 -14.910
ENSG00000069424 E055 35.9935258 0.0007647401 6.185504e-03 1.910303e-02 1 6082195 6082274 80 + 1.633 1.478 -0.531
ENSG00000069424 E056 0.7331471 0.0172671820 1.258420e-01 2.283475e-01 1 6082275 6082816 542 + 0.000 0.294 14.047
ENSG00000069424 E057 28.6720094 0.0023581615 3.560405e-02 8.281661e-02 1 6085204 6085248 45 + 1.523 1.385 -0.475
ENSG00000069424 E058 0.3697384 0.0274424043 4.181086e-01 5.613987e-01 1 6085249 6085739 491 + 0.000 0.172 13.083
ENSG00000069424 E059 1.6940691 0.0084408227 9.937953e-03 2.860704e-02 1 6085740 6085793 54 + 0.000 0.503 15.111
ENSG00000069424 E060 2.6947320 0.1450501351 5.698108e-03 1.781130e-02 1 6085794 6086157 364 + 0.000 0.652 15.357
ENSG00000069424 E061 2.4712130 0.0129641369 5.992626e-01 7.207089e-01 1 6086158 6086371 214 + 0.439 0.535 0.471
ENSG00000069424 E062 24.7430455 0.0080001694 3.875448e-02 8.872840e-02 1 6087467 6087500 34 + 1.475 1.317 -0.549
ENSG00000069424 E063 23.0543559 0.0060497134 1.368845e-01 2.437458e-01 1 6087501 6087511 11 + 1.414 1.301 -0.392
ENSG00000069424 E064 2.3249089 0.0244347831 6.145318e-01 7.329557e-01 1 6087512 6088959 1448 + 0.439 0.533 0.464
ENSG00000069424 E065 0.1482932 0.0417568714 8.601853e-01   1 6088960 6089007 48 + 0.000 0.094 12.074
ENSG00000069424 E066 29.2126181 0.0029714647 6.992047e-02 1.432472e-01 1 6089008 6089051 44 + 1.518 1.399 -0.409
ENSG00000069424 E067 0.0000000       1 6090296 6090388 93 +      
ENSG00000069424 E068 32.2196985 0.0039715998 1.490448e-01 2.603821e-01 1 6090389 6090475 87 + 1.546 1.454 -0.315
ENSG00000069424 E069 0.4460135 0.0244887357 2.517637e-02 6.223735e-02 1 6090730 6091262 533 + 0.364 0.000 -15.478
ENSG00000069424 E070 0.5149242 0.2162790569 1.000000e+00 1.000000e+00 1 6091263 6091307 45 + 0.158 0.172 0.151
ENSG00000069424 E071 0.1451727 0.0429110730 2.710146e-01   1 6091863 6092187 325 + 0.158 0.000 -13.891
ENSG00000069424 E072 0.2903454 0.3649112991 1.410776e-01   1 6094316 6094399 84 + 0.272 0.000 -14.202
ENSG00000069424 E073 31.5051070 0.0051467421 7.184455e-01 8.135380e-01 1 6094400 6094482 83 + 1.488 1.469 -0.066
ENSG00000069424 E074 16.1568051 0.0145242568 1.638379e-01 2.801419e-01 1 6094483 6094485 3 + 1.277 1.146 -0.464
ENSG00000069424 E075 2.6236759 0.0083315461 5.362613e-02 1.155951e-01 1 6094486 6094962 477 + 0.730 0.430 -1.371
ENSG00000069424 E076 1.3402279 0.0492348966 1.440984e-01 2.535858e-01 1 6094963 6095322 360 + 0.504 0.238 -1.586
ENSG00000069424 E077 35.5725730 0.0039882453 3.705727e-01 5.149933e-01 1 6095323 6095443 121 + 1.556 1.504 -0.179
ENSG00000069424 E078 32.8179934 0.0008450329 4.947926e-01 6.317019e-01 1 6095530 6095624 95 + 1.456 1.505 0.170
ENSG00000069424 E079 0.1482932 0.0417568714 8.601853e-01   1 6095625 6095938 314 + 0.000 0.094 12.074
ENSG00000069424 E080 1.8757761 0.0077585765 9.452028e-01 9.696111e-01 1 6095939 6096204 266 + 0.439 0.431 -0.046
ENSG00000069424 E081 3.7912919 0.0099638448 4.333594e-01 5.757631e-01 1 6096205 6096635 431 + 0.559 0.688 0.562
ENSG00000069424 E082 32.4472411 0.0007046228 7.077393e-01 8.055411e-01 1 6096636 6096756 121 + 1.500 1.482 -0.064
ENSG00000069424 E083 26.6821052 0.0008016028 1.683898e-01 2.860866e-01 1 6097269 6097357 89 + 1.469 1.380 -0.306
ENSG00000069424 E084 0.6589510 0.0206334456 6.646531e-01 7.724384e-01 1 6097358 6097516 159 + 0.158 0.237 0.730
ENSG00000069424 E085 0.6589510 0.0206334456 6.646531e-01 7.724384e-01 1 6097517 6097555 39 + 0.158 0.237 0.730
ENSG00000069424 E086 2.3217910 0.0072535289 5.597908e-02 1.196650e-01 1 6097556 6098484 929 + 0.693 0.389 -1.440
ENSG00000069424 E087 364.0127926 0.0007493205 3.884467e-06 2.833766e-05 1 6098485 6101193 2709 + 2.463 2.554 0.301