• ENSG00000188706
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000188706

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000357166 ENSG00000188706 HEK293_DMSO_6hA HEK293_OSMI2_6hA ZDHHC9 protein_coding protein_coding 47.15648 47.34854 74.44873 4.379757 7.320453 0.6528162 15.971187 16.592284 22.889121 1.6662570 2.0282028 0.4639105 0.3243542 0.35010000 0.30810000 -0.04200000 0.361106547 0.001260364 FALSE TRUE
ENST00000371064 ENSG00000188706 HEK293_DMSO_6hA HEK293_OSMI2_6hA ZDHHC9 protein_coding protein_coding 47.15648 47.34854 74.44873 4.379757 7.320453 0.6528162 5.417349 7.759955 6.810028 0.9408259 0.2710510 -0.1881285 0.1127667 0.16330000 0.09266667 -0.07063333 0.001260364 0.001260364 FALSE TRUE
MSTRG.34859.15 ENSG00000188706 HEK293_DMSO_6hA HEK293_OSMI2_6hA ZDHHC9 protein_coding   47.15648 47.34854 74.44873 4.379757 7.320453 0.6528162 4.832231 1.938967 8.695761 0.6828038 0.3620915 2.1592610 0.1185333 0.04016667 0.11883333 0.07866667 0.006884645 0.001260364 FALSE FALSE
MSTRG.34859.3 ENSG00000188706 HEK293_DMSO_6hA HEK293_OSMI2_6hA ZDHHC9 protein_coding   47.15648 47.34854 74.44873 4.379757 7.320453 0.6528162 8.995727 9.524911 18.436101 1.2115337 2.6285331 0.9520246 0.1919333 0.20306667 0.24580000 0.04273333 0.668483832 0.001260364 FALSE TRUE
MSTRG.34859.4 ENSG00000188706 HEK293_DMSO_6hA HEK293_OSMI2_6hA ZDHHC9 protein_coding   47.15648 47.34854 74.44873 4.379757 7.320453 0.6528162 6.772510 6.788290 13.030509 0.8236210 3.2201866 0.9397565 0.1434167 0.14283333 0.17020000 0.02736667 0.747961452 0.001260364 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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TableFilter v0.7.3

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_OSMI2_6hAColumn filter
HEK293_DMSO_6hAColumn filter
log2fold_HEK293_DMSO_6hA_HEK293_OSMI2_6hAColumn filter
ENSG00000188706 E001 1081.442614 0.0008605800 3.486691e-02 0.297076568 X 129803288 129805328 2041 - 3.012 3.049 0.123
ENSG00000188706 E002 2379.064870 0.0008250363 3.168932e-01 0.714070799 X 129805329 129806486 1158 - 3.367 3.381 0.047
ENSG00000188706 E003 441.739173 0.0004986203 4.499184e-01 0.803472117 X 129810905 129810986 82 - 2.630 2.648 0.059
ENSG00000188706 E004 253.803921 0.0001394048 7.086806e-01 0.918262513 X 129810987 129811001 15 - 2.392 2.404 0.039
ENSG00000188706 E005 363.333370 0.0001073916 5.457997e-01 0.852311697 X 129811406 129811446 41 - 2.546 2.561 0.049
ENSG00000188706 E006 464.377079 0.0001073868 2.602313e-02 0.262323006 X 129811447 129811509 63 - 2.642 2.681 0.133
ENSG00000188706 E007 516.470997 0.0001761022 8.969972e-03 0.164899619 X 129812718 129812820 103 - 2.684 2.729 0.150
ENSG00000188706 E008 24.922833 0.0051282892 9.157943e-02 0.441239630 X 129813661 129813676 16 - 1.339 1.468 0.446
ENSG00000188706 E009 401.258531 0.0016415174 1.972531e-01 0.600539080 X 129813677 129813725 49 - 2.581 2.615 0.112
ENSG00000188706 E010 511.653839 0.0001236587 4.535855e-01 0.805353794 X 129814658 129814770 113 - 2.705 2.696 -0.031
ENSG00000188706 E011 252.049882 0.0001652409 7.731517e-02 0.411982114 X 129814771 129814795 25 - 2.413 2.375 -0.124
ENSG00000188706 E012 8.202866 0.0894860724 6.149294e-01 0.882248623 X 129822888 129823402 515 - 0.932 0.989 0.212
ENSG00000188706 E013 441.634369 0.0001234038 2.857506e-03 0.095814355 X 129823679 129823837 159 - 2.660 2.612 -0.161
ENSG00000188706 E014 462.499989 0.0013186971 4.119724e-02 0.317982300 X 129828981 129829141 161 - 2.679 2.634 -0.151
ENSG00000188706 E015 436.181686 0.0012200054 5.643161e-01 0.859631924 X 129841779 129841918 140 - 2.638 2.627 -0.035
ENSG00000188706 E016 218.516738 0.0027835347 9.867520e-01 0.996730462 X 129841919 129841930 12 - 2.333 2.335 0.007
ENSG00000188706 E017 251.078171 0.0014754315 7.229183e-01 0.923153205 X 129841931 129841956 26 - 2.388 2.400 0.039
ENSG00000188706 E018 492.342317 0.0001279509 7.372989e-02 0.403610948 X 129841957 129842080 124 - 2.696 2.670 -0.087
ENSG00000188706 E019 390.828377 0.0014334146 2.417663e-02 0.255079871 X 129843259 129843326 68 - 2.609 2.559 -0.169
ENSG00000188706 E020 12.693188 0.0152307888 9.621003e-01 0.991299254 X 129843327 129843460 134 - 1.130 1.127 -0.014
ENSG00000188706 E021 4.810474 0.0046484712 9.922964e-01 0.998181527 X 129843539 129843562 24 - 0.756 0.758 0.008
ENSG00000188706 E022 5.285832 0.0180031756 3.306451e-01 0.725185095 X 129843563 129843695 133 - 0.713 0.857 0.572
ENSG00000188706 E023 387.180107 0.0008552853 3.684714e-05 0.007191876 X 129843696 129843909 214 - 2.622 2.533 -0.297