• ENSG00000136295
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000136295

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000258796 ENSG00000136295 HEK293_DMSO_6hA HEK293_OSMI2_6hA TTYH3 protein_coding protein_coding 33.43385 35.04986 52.15663 3.949077 5.601509 0.5733069 15.160433 14.361707 29.081217 2.0648623 3.6768613 1.01735228 0.44937083 0.40670000 0.55503333 0.14833333 5.857741e-05 5.857741e-05 FALSE TRUE
ENST00000403167 ENSG00000136295 HEK293_DMSO_6hA HEK293_OSMI2_6hA TTYH3 protein_coding protein_coding 33.43385 35.04986 52.15663 3.949077 5.601509 0.5733069 4.504894 5.499053 4.802070 0.4044472 0.8267893 -0.19514664 0.13069583 0.15836667 0.09626667 -0.06210000 3.059282e-01 5.857741e-05 FALSE TRUE
ENST00000407643 ENSG00000136295 HEK293_DMSO_6hA HEK293_OSMI2_6hA TTYH3 protein_coding protein_coding 33.43385 35.04986 52.15663 3.949077 5.601509 0.5733069 8.309967 9.512983 13.324692 1.2602618 2.2147977 0.48569911 0.24132917 0.27193333 0.25256667 -0.01936667 8.203356e-01 5.857741e-05 FALSE TRUE
ENST00000477439 ENSG00000136295 HEK293_DMSO_6hA HEK293_OSMI2_6hA TTYH3 protein_coding processed_transcript 33.43385 35.04986 52.15663 3.949077 5.601509 0.5733069 1.455002 2.520825 1.850524 0.1581184 0.4910117 -0.44389909 0.05045833 0.07283333 0.03820000 -0.03463333 3.302223e-01 5.857741e-05   FALSE
MSTRG.29402.1 ENSG00000136295 HEK293_DMSO_6hA HEK293_OSMI2_6hA TTYH3 protein_coding   33.43385 35.04986 52.15663 3.949077 5.601509 0.5733069 1.650562 1.321543 1.404376 0.5233834 0.4130682 0.08706699 0.05327917 0.04180000 0.02616667 -0.01563333 8.220350e-01 5.857741e-05 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_OSMI2_6hAColumn filter
HEK293_DMSO_6hAColumn filter
log2fold_HEK293_DMSO_6hA_HEK293_OSMI2_6hAColumn filter
ENSG00000136295 E001 0.2920894 0.0271813876 0.794956493   7 2631956 2631968 13 + 0.101 0.140 0.539
ENSG00000136295 E002 1.0323661 0.0385286961 0.913541762   7 2631969 2631985 17 + 0.311 0.331 0.131
ENSG00000136295 E003 12.6889017 0.0076659032 0.197861644 0.60100194 7 2631986 2632062 77 + 1.176 1.054 -0.438
ENSG00000136295 E004 40.3650913 0.0016941129 0.021458084 0.24278217 7 2632063 2632121 59 + 1.665 1.539 -0.429
ENSG00000136295 E005 51.7629066 0.0011113917 0.001288748 0.06264512 7 2632122 2632155 34 + 1.783 1.626 -0.533
ENSG00000136295 E006 149.0215661 0.0002272757 0.019593615 0.23370319 7 2632156 2632278 123 + 2.198 2.138 -0.201
ENSG00000136295 E007 10.6331729 0.0109011843 0.565019130 0.85994775 7 2645532 2645886 355 + 1.022 1.095 0.267
ENSG00000136295 E008 262.6052916 0.0001470613 0.068989947 0.39359897 7 2646853 2647022 170 + 2.429 2.398 -0.104
ENSG00000136295 E009 275.3875797 0.0014374845 0.248914303 0.65455919 7 2647142 2647253 112 + 2.444 2.426 -0.059
ENSG00000136295 E010 338.3511276 0.0008223092 0.163556425 0.55845895 7 2647418 2647638 221 + 2.534 2.513 -0.069
ENSG00000136295 E011 17.5958104 0.0696015636 0.035726388 0.29968029 7 2647703 2647955 253 + 1.107 1.401 1.034
ENSG00000136295 E012 5.9802249 0.0403378000 0.258875536 0.66440078 7 2647956 2647958 3 + 0.745 0.917 0.672
ENSG00000136295 E013 197.6676289 0.0010254601 0.456034433 0.80670584 7 2647959 2648054 96 + 2.295 2.285 -0.034
ENSG00000136295 E014 45.4662541 0.0765158603 0.018678743 0.22944669 7 2648055 2648538 484 + 1.499 1.808 1.049
ENSG00000136295 E015 229.7900810 0.0002599808 0.907778900 0.97810087 7 2649567 2649639 73 + 2.352 2.359 0.023
ENSG00000136295 E016 298.1332268 0.0001475960 0.457860246 0.80747631 7 2649913 2649988 76 + 2.473 2.466 -0.021
ENSG00000136295 E017 269.7109137 0.0001450039 0.314461500 0.71183406 7 2652187 2652242 56 + 2.433 2.420 -0.043
ENSG00000136295 E018 1.6909913 0.1401917387 0.065846821 0.38647255 7 2652825 2652917 93 + 0.247 0.608 2.000
ENSG00000136295 E019 313.5538366 0.0001344127 0.124924281 0.50224656 7 2652918 2653010 93 + 2.504 2.481 -0.074
ENSG00000136295 E020 279.1546272 0.0001358562 0.317526547 0.71474810 7 2656092 2656184 93 + 2.449 2.436 -0.041
ENSG00000136295 E021 340.5303246 0.0001391124 0.338426743 0.73087157 7 2656398 2656534 137 + 2.516 2.544 0.093
ENSG00000136295 E022 362.8306627 0.0019335811 0.752534275 0.93345689 7 2658286 2658459 174 + 2.552 2.560 0.027
ENSG00000136295 E023 232.5478976 0.0002099102 0.226926821 0.63190706 7 2658940 2659015 76 + 2.373 2.354 -0.065
ENSG00000136295 E024 7.6729854 0.0283301523 0.931999366 0.98381125 7 2659940 2660040 101 + 0.942 0.955 0.052
ENSG00000136295 E025 849.5080389 0.0009821475 0.486492290 0.82275922 7 2661668 2662325 658 + 2.915 2.940 0.085
ENSG00000136295 E026 219.3774105 0.0010953726 0.894360022 0.97471525 7 2662326 2662395 70 + 2.332 2.346 0.045
ENSG00000136295 E027 3207.4389728 0.0009435904 0.073261483 0.40277652 7 2662396 2664802 2407 + 3.488 3.520 0.105