• ENSG00000105778
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000105778

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000318709 ENSG00000105778 HEK293_DMSO_6hA HEK293_OSMI2_6hA AVL9 protein_coding protein_coding 7.898339 4.426494 3.814605 0.8953452 0.6668337 -0.2141093 4.9968746 3.07703408 2.5890256 0.45025639 0.78655142 -0.2482505 0.62600417 0.7193667 0.66053333 -0.05883333 0.86266172 0.03454445 FALSE TRUE
ENST00000409301 ENSG00000105778 HEK293_DMSO_6hA HEK293_OSMI2_6hA AVL9 protein_coding protein_coding 7.898339 4.426494 3.814605 0.8953452 0.6668337 -0.2141093 0.3272419 0.00000000 0.2559805 0.00000000 0.25598048 4.7332485 0.04570417 0.0000000 0.06043333 0.06043333 0.74629559 0.03454445 FALSE TRUE
MSTRG.29684.1 ENSG00000105778 HEK293_DMSO_6hA HEK293_OSMI2_6hA AVL9 protein_coding   7.898339 4.426494 3.814605 0.8953452 0.6668337 -0.2141093 0.6078856 0.00000000 0.1487321 0.00000000 0.14873206 3.9885217 0.05993750 0.0000000 0.05930000 0.05930000 0.75217760 0.03454445 TRUE TRUE
MSTRG.29684.11 ENSG00000105778 HEK293_DMSO_6hA HEK293_OSMI2_6hA AVL9 protein_coding   7.898339 4.426494 3.814605 0.8953452 0.6668337 -0.2141093 0.3351825 0.03360102 0.3326713 0.01689202 0.08987216 2.9743917 0.04820833 0.0095000 0.08736667 0.07786667 0.03454445 0.03454445 TRUE TRUE
MSTRG.29684.9 ENSG00000105778 HEK293_DMSO_6hA HEK293_OSMI2_6hA AVL9 protein_coding   7.898339 4.426494 3.814605 0.8953452 0.6668337 -0.2141093 0.3063467 0.64740906 0.1973409 0.27746490 0.09387210 -1.6647864 0.06275833 0.1366667 0.05136667 -0.08530000 0.69150265 0.03454445 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_OSMI2_6hAColumn filter
HEK293_DMSO_6hAColumn filter
log2fold_HEK293_DMSO_6hA_HEK293_OSMI2_6hAColumn filter
ENSG00000105778 E001 0.0000000       7 32495402 32495425 24 +      
ENSG00000105778 E002 0.1767706 0.0450961140 0.385165155   7 32495426 32495448 23 + 0.133 0.000 -9.823
ENSG00000105778 E003 0.5347512 0.1696108299 0.066388397   7 32495449 32495488 40 + 0.324 0.000 -13.129
ENSG00000105778 E004 3.3580949 0.0632230148 0.001154591 0.05877915 7 32495489 32495520 32 + 0.864 0.265 -2.909
ENSG00000105778 E005 3.1813244 0.0617788057 0.001860039 0.07682582 7 32495521 32495525 5 + 0.840 0.265 -2.817
ENSG00000105778 E006 3.5376678 0.0648261143 0.003416763 0.10517730 7 32495526 32495527 2 + 0.864 0.327 -2.493
ENSG00000105778 E007 5.1528060 0.0594240890 0.002461168 0.08887290 7 32495528 32495535 8 + 0.997 0.471 -2.189
ENSG00000105778 E008 9.7356616 0.0134242459 0.001503428 0.06838389 7 32495536 32495584 49 + 1.191 0.819 -1.373
ENSG00000105778 E009 15.1858477 0.0432113180 0.215965107 0.62060288 7 32495585 32495631 47 + 1.291 1.108 -0.652
ENSG00000105778 E010 27.0028949 0.0029882222 0.383169011 0.76233839 7 32495632 32495802 171 + 1.473 1.409 -0.221
ENSG00000105778 E011 1.0912032 0.0587133395 0.111460910   7 32531615 32539269 7655 + 0.133 0.427 2.231
ENSG00000105778 E012 30.2576674 0.0307685137 0.656636411 0.89937120 7 32543141 32543254 114 + 1.516 1.469 -0.162
ENSG00000105778 E013 17.9550336 0.0400381293 0.950154941 0.98834836 7 32543255 32543261 7 + 1.277 1.269 -0.028
ENSG00000105778 E014 29.3220602 0.0232208730 0.573654472 0.86377819 7 32544694 32544779 86 + 1.507 1.453 -0.186
ENSG00000105778 E015 29.7452810 0.0283657673 0.925050314 0.98222213 7 32548847 32548918 72 + 1.472 1.485 0.043
ENSG00000105778 E016 27.9146137 0.0367810129 0.751513382 0.93298869 7 32551334 32551423 90 + 1.426 1.471 0.156
ENSG00000105778 E017 21.0161884 0.0125085238 0.894013869 0.97463771 7 32552229 32552295 67 + 1.336 1.325 -0.035
ENSG00000105778 E018 20.3471981 0.0110350721 0.450227251 0.80370043 7 32553727 32553767 41 + 1.355 1.290 -0.229
ENSG00000105778 E019 20.2078249 0.0036587730 0.843424933 0.96113638 7 32554558 32554596 39 + 1.309 1.325 0.056
ENSG00000105778 E020 26.7209155 0.0077615003 0.686079921 0.91037634 7 32558559 32558628 70 + 1.456 1.427 -0.099
ENSG00000105778 E021 52.3820471 0.0117584465 0.326675555 0.72210175 7 32558929 32559222 294 + 1.756 1.695 -0.206
ENSG00000105778 E022 50.1707796 0.0014652367 0.626016208 0.88647460 7 32559223 32559464 242 + 1.690 1.713 0.077
ENSG00000105778 E023 38.5219634 0.0054623864 0.173307461 0.57089498 7 32570020 32570154 135 + 1.537 1.620 0.284
ENSG00000105778 E024 2.3578933 0.0089359679 0.412297776 0.78194657 7 32570155 32570166 12 + 0.446 0.580 0.644
ENSG00000105778 E025 2.2592826 0.0082557357 0.005071263 0.12773278 7 32573110 32573198 89 + 0.724 0.265 -2.356
ENSG00000105778 E026 63.5342950 0.0052908979 0.220562778 0.62516182 7 32573199 32573418 220 + 1.771 1.830 0.198
ENSG00000105778 E027 45.2093331 0.0007555764 0.120893672 0.49534498 7 32575955 32576072 118 + 1.611 1.689 0.266
ENSG00000105778 E028 1.1632618 0.0136968632 0.097669963   7 32580207 32580218 12 + 0.133 0.428 2.226
ENSG00000105778 E029 32.7715508 0.0009974322 0.382696319 0.76201274 7 32580219 32580272 54 + 1.488 1.539 0.174
ENSG00000105778 E030 2.0069344 0.1446274068 0.624926062 0.88597223 7 32580763 32580790 28 + 0.395 0.508 0.579
ENSG00000105778 E031 1.4989326 0.0119342024 0.182614003   7 32580791 32580801 11 + 0.235 0.471 1.446
ENSG00000105778 E032 35.9081535 0.0008090321 0.566121310 0.86048013 7 32580802 32580890 89 + 1.545 1.576 0.106
ENSG00000105778 E033 69.6922218 0.0005716128 0.231701592 0.63670197 7 32583792 32584102 311 + 1.819 1.866 0.160
ENSG00000105778 E034 123.9781472 0.0076635709 0.860507066 0.96585993 7 32584103 32585452 1350 + 2.101 2.082 -0.063
ENSG00000105778 E035 28.6248768 0.0009800747 0.352168631 0.74117953 7 32585453 32585535 83 + 1.429 1.487 0.200
ENSG00000105778 E036 66.5438188 0.0194968916 0.469687158 0.81373579 7 32585536 32585925 390 + 1.798 1.844 0.154
ENSG00000105778 E037 327.7145147 0.0044322330 0.704653184 0.91689405 7 32585926 32588726 2801 + 2.509 2.512 0.010