ENSG00000101266

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000349736 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 21.826449 17.569910 15.822446 3.992954 3.4535940 -0.1510435 0.2854375 0.3669000 0.26356667 -0.10333333 2.469261e-01 1.170979e-12 FALSE TRUE
ENST00000400217 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 15.746444 4.859892 10.790184 1.061069 1.0292005 1.1490942 0.1630542 0.1027667 0.18610000 0.08333333 2.047308e-02 1.170979e-12 FALSE TRUE
ENST00000642689 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 2.987444 0.000000 5.569612 0.000000 3.2461418 9.1240209 0.0479625 0.0000000 0.08566667 0.08566667 1.170979e-12 1.170979e-12 FALSE TRUE
ENST00000644885 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 7.689645 4.720819 8.596519 1.336988 2.2235447 0.8633399 0.1053083 0.1145333 0.14456667 0.03003333 7.533376e-01 1.170979e-12 FALSE TRUE
ENST00000645234 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 11.378813 6.303319 5.655827 3.242490 1.0651393 -0.1561122 0.1233375 0.1189667 0.09843333 -0.02053333 9.027948e-01 1.170979e-12 FALSE TRUE
ENST00000645260 ENSG00000101266 HEK293_DMSO_6hA HEK293_OSMI2_6hA CSNK2A1 protein_coding protein_coding 84.61664 47.2586 58.67449 8.395825 7.970833 0.3120974 10.580683 5.934579 5.161299 1.081456 0.6703339 -0.2010477 0.1126208 0.1253667 0.08983333 -0.03553333 3.318895e-01 1.170979e-12 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_OSMI2_6hA HEK293_DMSO_6hA log2fold_HEK293_DMSO_6hA_HEK293_OSMI2_6hA
ENSG00000101266 E001 1.0530388 4.371500e-01 7.721620e-01   20 472498 472507 10 - 0.336 0.301 -0.224
ENSG00000101266 E002 46.2780249 1.684337e-03 1.608876e-02 2.154386e-01 20 472508 473260 753 - 1.600 1.739 0.473
ENSG00000101266 E003 13.4627417 3.132772e-02 1.084301e-01 4.727385e-01 20 473261 473336 76 - 1.039 1.251 0.762
ENSG00000101266 E004 38.5668258 1.566426e-02 4.279520e-01 7.908567e-01 20 473337 473950 614 - 1.564 1.633 0.236
ENSG00000101266 E005 59.7788846 4.425521e-03 1.933375e-04 2.006121e-02 20 473951 478464 4514 - 1.656 1.871 0.727
ENSG00000101266 E006 3.9425667 4.275366e-02 1.462114e-02 2.063584e-01 20 478465 478760 296 - 0.450 0.857 1.768
ENSG00000101266 E007 44.2146908 7.113167e-04 2.799651e-02 2.712233e-01 20 478761 481109 2349 - 1.586 1.712 0.428
ENSG00000101266 E008 9.4749572 2.613871e-03 9.988170e-01 9.996483e-01 20 481110 481146 37 - 1.010 1.019 0.033
ENSG00000101266 E009 12.2897902 2.144434e-03 6.805236e-01 9.083900e-01 20 481147 481149 3 - 1.135 1.105 -0.105
ENSG00000101266 E010 15.8890807 1.751416e-03 6.531522e-01 8.978349e-01 20 481150 481154 5 - 1.198 1.246 0.169
ENSG00000101266 E011 42.5275605 6.504857e-04 1.871001e-02 2.295504e-01 20 481155 481191 37 - 1.558 1.695 0.467
ENSG00000101266 E012 291.4506971 1.026553e-03 7.058048e-09 1.314137e-05 20 481192 481622 431 - 2.374 2.532 0.526
ENSG00000101266 E013 906.2636819 2.258958e-03 1.458662e-07 1.335434e-04 20 481623 482710 1088 - 2.883 3.015 0.441
ENSG00000101266 E014 69.3157991 4.298613e-04 1.357272e-01 5.190608e-01 20 482711 482714 4 - 1.801 1.875 0.249
ENSG00000101266 E015 66.9533147 4.751149e-04 3.289367e-01 7.235848e-01 20 482715 482721 7 - 1.797 1.850 0.178
ENSG00000101266 E016 64.4506808 4.919780e-04 2.013165e-01 6.049388e-01 20 482722 482723 2 - 1.773 1.840 0.225
ENSG00000101266 E017 89.4439460 6.686994e-04 3.419053e-01 7.334348e-01 20 482724 482731 8 - 1.925 1.971 0.157
ENSG00000101266 E018 77.3574400 1.518577e-03 3.543893e-01 7.428064e-01 20 482732 482735 4 - 1.860 1.910 0.166
ENSG00000101266 E019 76.9285108 1.142302e-03 2.242703e-01 6.291664e-01 20 482736 482741 6 - 1.852 1.913 0.205
ENSG00000101266 E020 81.2905709 5.525356e-04 8.498681e-02 4.279907e-01 20 482742 482747 6 - 1.866 1.945 0.264
ENSG00000101266 E021 111.4916485 1.260749e-03 1.939735e-01 5.964256e-01 20 482748 482776 29 - 2.015 2.071 0.188
ENSG00000101266 E022 112.2911695 3.512671e-04 5.619485e-02 3.615014e-01 20 482777 482781 5 - 2.009 2.084 0.250
ENSG00000101266 E023 290.6892812 2.298289e-03 5.393506e-01 8.495213e-01 20 482782 482856 75 - 2.449 2.474 0.083
ENSG00000101266 E024 214.1286141 3.073646e-03 8.376180e-01 9.595302e-01 20 482857 482864 8 - 2.331 2.329 -0.007
ENSG00000101266 E025 208.6289419 1.034881e-03 6.436240e-01 8.937524e-01 20 482865 482886 22 - 2.307 2.328 0.071
ENSG00000101266 E026 248.2394357 5.533484e-04 9.663839e-01 9.923378e-01 20 482887 482921 35 - 2.387 2.397 0.034
ENSG00000101266 E027 907.0859233 3.008038e-04 7.340232e-01 9.270621e-01 20 482922 483389 468 - 2.949 2.961 0.042
ENSG00000101266 E028 547.2725753 8.045912e-05 3.633801e-01 7.492397e-01 20 483390 483764 375 - 2.737 2.734 -0.011
ENSG00000101266 E029 92.2767818 3.384312e-04 8.522498e-01 9.634632e-01 20 483765 483790 26 - 1.960 1.977 0.057
ENSG00000101266 E030 271.4201500 1.260033e-03 5.269867e-01 8.434180e-01 20 483791 483927 137 - 2.439 2.428 -0.037
ENSG00000101266 E031 429.5789166 1.792033e-03 4.818507e-02 3.394363e-01 20 483928 484076 149 - 2.657 2.609 -0.160
ENSG00000101266 E032 2.3348039 9.090867e-03 2.636615e-02 2.638510e-01 20 484077 484090 14 - 0.284 0.662 1.957
ENSG00000101266 E033 0.5247464 3.556911e-01 6.330462e-01   20 486364 486375 12 - 0.119 0.219 1.055
ENSG00000101266 E034 398.1291293 2.465257e-04 3.674612e-05 7.191876e-03 20 486376 486462 87 - 2.631 2.563 -0.227
ENSG00000101266 E035 1.5768951 8.246580e-02 8.267168e-02   20 486463 487426 964 - 0.208 0.555 2.074
ENSG00000101266 E036 461.0980145 1.074395e-04 1.690751e-09 4.349789e-06 20 487427 487575 149 - 2.705 2.616 -0.299
ENSG00000101266 E037 8.8398521 4.912632e-03 3.672771e-04 2.981927e-02 20 487576 488677 1102 - 0.726 1.147 1.593
ENSG00000101266 E038 441.5838891 9.717861e-05 1.082570e-06 6.040122e-04 20 488678 488778 101 - 2.678 2.607 -0.239
ENSG00000101266 E039 10.6146559 4.704416e-02 3.081802e-01 7.065042e-01 20 488779 489247 469 - 0.975 1.134 0.579
ENSG00000101266 E040 6.1449388 8.081071e-02 1.675642e-01 5.638646e-01 20 489503 489779 277 - 0.708 0.946 0.931
ENSG00000101266 E041 413.7514953 1.177529e-04 1.816059e-04 1.930322e-02 20 489780 489881 102 - 2.642 2.587 -0.184
ENSG00000101266 E042 302.8273247 4.379883e-04 5.400738e-02 3.558854e-01 20 492254 492338 85 - 2.496 2.464 -0.109
ENSG00000101266 E043 192.3818148 1.976239e-04 1.582409e-02 2.138851e-01 20 492339 492364 26 - 2.307 2.256 -0.172
ENSG00000101266 E044 3.7220708 2.328139e-01 8.587597e-01 9.653468e-01 20 492365 492717 353 - 0.660 0.666 0.026
ENSG00000101266 E045 0.3340335 2.744240e-02 1.928420e-01   20 494131 494224 94 - 0.000 0.218 11.315
ENSG00000101266 E046 4.1243728 3.247425e-02 3.676463e-05 7.191876e-03 20 494225 495718 1494 - 0.209 0.928 3.592
ENSG00000101266 E047 162.9560977 2.055200e-04 2.317692e-03 8.587587e-02 20 495719 495731 13 - 2.247 2.173 -0.247
ENSG00000101266 E048 233.8246676 1.627895e-04 2.185258e-02 2.446109e-01 20 495732 495796 65 - 2.390 2.348 -0.142
ENSG00000101266 E049 155.3434277 2.328074e-04 5.286215e-01 8.443036e-01 20 495797 495802 6 - 2.197 2.189 -0.025
ENSG00000101266 E050 1.5246076 1.742372e-01 3.905106e-01   20 495803 496728 926 - 0.291 0.470 1.033
ENSG00000101266 E051 180.6675952 2.253209e-04 4.733748e-01 8.156454e-01 20 497721 497746 26 - 2.261 2.253 -0.029
ENSG00000101266 E052 217.3401850 2.030775e-04 5.098262e-01 8.346634e-01 20 497747 497780 34 - 2.340 2.335 -0.018
ENSG00000101266 E053 2.3290477 5.893711e-02 6.385316e-01 8.916428e-01 20 497781 498196 416 - 0.546 0.469 -0.370
ENSG00000101266 E054 0.6847724 6.128411e-01 5.847736e-01   20 498358 498454 97 - 0.300 0.121 -1.632
ENSG00000101266 E055 2.4467184 1.252701e-01 7.683164e-01 9.390416e-01 20 498455 499254 800 - 0.504 0.557 0.252
ENSG00000101266 E056 231.4032580 1.081716e-03 4.155143e-01 7.837998e-01 20 499255 499305 51 - 2.373 2.360 -0.045
ENSG00000101266 E057 2.8238313 1.352301e-01 2.035175e-01 6.073017e-01 20 499306 499524 219 - 0.410 0.691 1.312
ENSG00000101266 E058 2.8259704 8.947286e-02 8.443715e-01 9.614098e-01 20 499525 499573 49 - 0.549 0.593 0.202
ENSG00000101266 E059 2.1753374 1.725944e-01 3.188571e-01 7.157271e-01 20 499574 499630 57 - 0.358 0.591 1.177
ENSG00000101266 E060 1.8603394 2.645037e-01 2.412791e-01 6.463615e-01 20 499631 499832 202 - 0.293 0.556 1.430
ENSG00000101266 E061 164.4643795 5.030087e-04 5.660946e-01 8.604801e-01 20 499833 499869 37 - 2.222 2.216 -0.022
ENSG00000101266 E062 166.9622514 2.003504e-04 4.308305e-01 7.924002e-01 20 499870 499923 54 - 2.207 2.238 0.107
ENSG00000101266 E063 110.9115702 2.677823e-04 8.630762e-01 9.666358e-01 20 499924 499934 11 - 2.045 2.050 0.016
ENSG00000101266 E064 0.6574601 1.938749e-02 3.019616e-01   20 499935 500030 96 - 0.117 0.296 1.664
ENSG00000101266 E065 2.7773867 1.029631e-02 4.427560e-01 7.991271e-01 20 500031 500115 85 - 0.500 0.629 0.594
ENSG00000101266 E066 1.7832173 1.062145e-02 1.198607e-01 4.932573e-01 20 500116 500171 56 - 0.284 0.557 1.496
ENSG00000101266 E067 3.7666802 6.006228e-03 1.817677e-02 2.268575e-01 20 500172 500760 589 - 0.455 0.816 1.584
ENSG00000101266 E068 7.1152704 6.393888e-03 5.549575e-04 3.842936e-02 20 500761 503064 2304 - 0.641 1.082 1.712
ENSG00000101266 E069 1.1572752 4.101082e-02 9.712094e-01   20 503065 503281 217 - 0.347 0.362 0.091
ENSG00000101266 E070 1.8105906 3.853625e-01 6.093531e-01 8.797154e-01 20 503307 503695 389 - 0.355 0.515 0.845
ENSG00000101266 E071 3.7243215 8.940664e-02 2.892555e-02 2.753302e-01 20 504166 505117 952 - 0.405 0.835 1.919
ENSG00000101266 E072 179.7738718 2.116812e-04 8.942459e-01 9.746743e-01 20 505118 505229 112 - 2.252 2.259 0.023
ENSG00000101266 E073 0.7137611 2.176816e-02 9.714438e-01   20 505230 505250 21 - 0.209 0.218 0.079
ENSG00000101266 E074 2.8200202 1.107263e-01 2.838469e-02 2.732108e-01 20 505911 508450 2540 - 0.289 0.742 2.262
ENSG00000101266 E075 214.6449882 1.577540e-04 7.858560e-02 4.147375e-01 20 508451 508605 155 - 2.347 2.315 -0.107
ENSG00000101266 E076 108.8879424 1.251159e-03 3.658778e-01 7.507893e-01 20 508606 508621 16 - 2.053 2.028 -0.084
ENSG00000101266 E077 143.2389500 3.077252e-03 2.523037e-01 6.581207e-01 20 508622 508660 39 - 2.179 2.140 -0.129
ENSG00000101266 E078 1.3737897 1.294728e-02 8.383890e-02   20 510168 510338 171 - 0.208 0.516 1.892
ENSG00000101266 E079 0.0000000       20 526696 526942 247 -      
ENSG00000101266 E080 23.9025729 1.535959e-03 8.460614e-01 9.618472e-01 20 527933 528049 117 - 1.377 1.400 0.081
ENSG00000101266 E081 1.1609351 2.187006e-01 7.457222e-01   20 539199 539674 476 - 0.286 0.365 0.498
ENSG00000101266 E082 0.9908042 4.824906e-02 4.527970e-01   20 539675 539824 150 - 0.350 0.218 -0.924
ENSG00000101266 E083 0.8190360 1.635594e-02 1.818813e-01   20 539825 540009 185 - 0.349 0.123 -1.920
ENSG00000101266 E084 0.1767706 3.558499e-02 5.010308e-01   20 540828 540889 62 - 0.117 0.000 -10.808
ENSG00000101266 E085 0.1767706 3.558499e-02 5.010308e-01   20 540890 541099 210 - 0.117 0.000 -10.808
ENSG00000101266 E086 0.6747676 3.673835e-02 3.057039e-01   20 543054 543387 334 - 0.117 0.296 1.663
ENSG00000101266 E087 0.3485388 2.744240e-02 9.817549e-01   20 543388 543631 244 - 0.117 0.123 0.080
ENSG00000101266 E088 0.3535412 5.413464e-01 3.381166e-01   20 543632 543671 40 - 0.217 0.000 -10.505
ENSG00000101266 E089 129.1047293 1.494623e-03 1.344076e-02 1.999039e-01 20 543672 543835 164 - 2.150 2.072 -0.264